| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813447
Identifier: 237813447
GI number: 237813447
Start: 3113607
End: 3113855
Strand: Direct
Name: 237813447
Synonym: GBP346_A3223
Alternate gene names: NA
Gene position: 3113607-3113855 (Clockwise)
Preceding gene: 237813444
Following gene: 237813449
Centisome position: 75.97
GC content: 73.49
Gene sequence:
>249_bases TTGGCGGAAAGACTGGCGCGACGCGGGGCCGGGCATCCATCCGGCATCGCGCCGCCGCCCCCGCATGGCTGCGCGGCGTC GGACACGCCCGCCCGGCTGCGCGCATGCTCAACTGTATGCGGATTTGCGCGCGCCCGGCAATCGGCCGACCGGCCGATGC GCGGCGCGGCGGCCGGCATGCGCGCACGCCGTTTCGCACCGCCGGCCGTTTCGCCGTTCGCCATTCCCGCCGCCGTAATC ATGATGTAA
Upstream 100 bases:
>100_bases GCGCATTGAGGCCGATGCTCAGGAACCAGCGCAGCAACGCGCCGAACCCGGCGCCGACGAAAATCGCGACGATCGAATAG AACAAGGCGGCACCTCACGA
Downstream 100 bases:
>100_bases ATCCCCAAATAAAACTTCCGTTCGTTCTATTTCCAGGAAACCCGATAAAACACAAACAATGAAAAACGCATTCAATTATT CGGATTATTGAGAACGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAERLARRGAGHPSGIAPPPPHGCAASDTPARLRACSTVCGFARARQSADRPMRGAAAGMRARRFAPPAVSPFAIPAAVI MM
Sequences:
>Translated_82_residues MAERLARRGAGHPSGIAPPPPHGCAASDTPARLRACSTVCGFARARQSADRPMRGAAAGMRARRFAPPAVSPFAIPAAVI MM >Mature_81_residues AERLARRGAGHPSGIAPPPPHGCAASDTPARLRACSTVCGFARARQSADRPMRGAAAGMRARRFAPPAVSPFAIPAAVIM M
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8451; Mature: 8320
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERLARRGAGHPSGIAPPPPHGCAASDTPARLRACSTVCGFARARQSADRPMRGAAAGM CCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RARRFAPPAVSPFAIPAAVIMM HHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AERLARRGAGHPSGIAPPPPHGCAASDTPARLRACSTVCGFARARQSADRPMRGAAAGM CHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RARRFAPPAVSPFAIPAAVIMM HHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA