| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813425
Identifier: 237813425
GI number: 237813425
Start: 3096259
End: 3096717
Strand: Direct
Name: 237813425
Synonym: GBP346_A3200
Alternate gene names: NA
Gene position: 3096259-3096717 (Clockwise)
Preceding gene: 237813424
Following gene: 237813426
Centisome position: 75.54
GC content: 68.85
Gene sequence:
>459_bases ATGACCGCCTTCCTGCTGATCTGGAGCCCCAAGAAATGGCCGTGGCCCGAGCTGCCCGAGATGGCCGCGCGCGTGAAGGC AGGCGAAGCGGTCGCCGACGTCTGGGGTTGCGGCTTCTCGCGCAGCATCCTGCCGGGCGACCGCGTGTTCCTGCATCGCG TCGCGCAAGAGCCGAAGGGCGTGTTCGGCTCCGGCTACGTGACGCGCGGGCCGTACGAGGTGCCCGATCCGCAGACGAAG CGCGGCTACCGGCTTTGCATCGACTTCGTCTACGACTGGCTCGTCGACGGGCATAGCGAAGTGGTGATCCCGCGCGACGC GCTGCGCGTGCATCCGTTCTCGGTCCAGACATGGGACGCGCAGACATCCGGCACCTCGATCAAGCCGGTCGCGGAGGGCG CGCTCGAGAAACGCTGGGCGGAGCTCACCGGCAAGCGCAAGCCGCCCAAGCGCGCGTAG
Upstream 100 bases:
>100_bases ACCGGCGGGCCGGCGCCCTGCACCCGCGCGCGGGCTGGCCCGCGCTTCGGTTAAGCTCGCGCTTTCGTTCAATTCACCCT CCTCCGTTCGAGTTGCCGAC
Downstream 100 bases:
>100_bases TGCGCGCGTGTCGCGCGGGTGCGCGCGCGCCGTGGCGTCCCGTCCCGCGCATTGCGCGGCGAGCCGCGGCGAACGCCGCC ACGACGCACCGACTCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTAFLLIWSPKKWPWPELPEMAARVKAGEAVADVWGCGFSRSILPGDRVFLHRVAQEPKGVFGSGYVTRGPYEVPDPQTK RGYRLCIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGKRKPPKRA
Sequences:
>Translated_152_residues MTAFLLIWSPKKWPWPELPEMAARVKAGEAVADVWGCGFSRSILPGDRVFLHRVAQEPKGVFGSGYVTRGPYEVPDPQTK RGYRLCIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGKRKPPKRA >Mature_151_residues TAFLLIWSPKKWPWPELPEMAARVKAGEAVADVWGCGFSRSILPGDRVFLHRVAQEPKGVFGSGYVTRGPYEVPDPQTKR GYRLCIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGKRKPPKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17103; Mature: 16972
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFLLIWSPKKWPWPELPEMAARVKAGEAVADVWGCGFSRSILPGDRVFLHRVAQEPKG CEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC VFGSGYVTRGPYEVPDPQTKRGYRLCIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDA CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCEEEECCC QTSGTSIKPVAEGALEKRWAELTGKRKPPKRA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TAFLLIWSPKKWPWPELPEMAARVKAGEAVADVWGCGFSRSILPGDRVFLHRVAQEPKG EEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC VFGSGYVTRGPYEVPDPQTKRGYRLCIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDA CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCEEEECCC QTSGTSIKPVAEGALEKRWAELTGKRKPPKRA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA