| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is zwf [H]
Identifier: 237813415
GI number: 237813415
Start: 3085619
End: 3087088
Strand: Direct
Name: zwf [H]
Synonym: GBP346_A3190
Alternate gene names: 237813415
Gene position: 3085619-3087088 (Clockwise)
Preceding gene: 237813409
Following gene: 237813416
Centisome position: 75.29
GC content: 68.3
Gene sequence:
>1470_bases ATGCATACCGATTCGAGCTTCACCTTCGTTCTCTTCGGCGGCACCGGCGATCTGTCGATGCGCAAGATCCTCCCCGCGCT CTTCGAAGCGCATCGCGCGAACATGCTGTCGGAAGCCGGCAGGATCGTCGCCGTGGCCCGCCACGCGGCGGACCGCGAAG GCTACCTGCAGTGGGTCGAGGAGCACGTGAAGCCGCACGCGGCGAAGGCGGCGGGCGGCGCGTTCGACGAAGCGGTCTGG CGGAGCTTTCTCGAGCGCATCGTCTACGTGAAGCTCGACCTCGGCCGCGCGGAAGATTACGCGCTGCTGCGCGACACGGT CGGCGGGCTCTCGGGCATCCGCGTGTTCTACCTGGCGACGGGCCCGTCGCTGTTCGTGCCGATCTGCAAGGCGCTCGCCG CAGTGGGCCTGAACGAAGGCGCGCGCATCGTGCTCGAGAAGCCGCTCGGCTACGACCTGCGCTCGTCGAACGCGATCAAC GACGCGGTGGGCGAGATCTTCGCCGAAGACCAGATCTACCGGATCGATCACTACCTCGGCAAGGAGCCGGTGCAGAACCT GCTCGCGCTGCGCTTCGGCAACGCGCTCTTCGAGCCGCTGTGGCGCCGCGAATGGGTGGAGAGCATCCAGATCACGATCG CCGAGGAGCTCGGCGTCGAGGCGCGCGGCGATTTCTACGACAATACCGGCGCGCTGCGCGACATGGTGCAGAACCACCTG CTGCAGTTGCTGTCGATCGTCGCGATGGAGCCGCCGCACTCGATGGATTCCGATTCGGTGCGCGACGAGAAGCTGCGCGT GCTGCGCGCGTTGAAGCCCGTCGATCCGCGCGACATCGGCAAGGTCGCGGTGCGCGGCCAGTACCACGCGGGCGTGATCA AGGGCGCGCAGGTGCCCGCGTACGCGACCGAGCCCGGCGTGAAGGCGGACAGCCAGACCGAGACGTTCGTCGCGCTGAAG GTCGAGATCGAGAACTGGCGCTGGGCCGGCGTGCCGTTCTTCCTGCGCACCGGCAAGCGCCTCGCCGACCGCGTCGCGGA GATCGTCGTCAACTTCCGGCCGGTGCCGCACTCGGCGCTCGGCCCCACCGCGCTGCGCGCGGGCGCGAACCGTCTCGTGA TCCGGCTGCAGCCGAACGAATCGATCCGCCTGTACTGCCTCGCGAAGCAGCCGGGCGAAGGGATGAACCTGGCGAGCGTG CACCTCGACCTCGCGTTCGACCAGTTCTTCAAGGAAGGCCAGATGGAGGCGTACCAGCGCCTGCTGCTCGACGTGATCAA CGGCCGCCTCGCGCTCTTCGTCCGGCGCGACGAACAGGAAGCCGCATGGCGCTGGGTCGAGCCGATCCTGAACGAATGGG CGCGCACGACGAAGCCGCCGAAGCCGTACGCGGCCGGCACCTGGGGCCCGGCCGCGGCGAGCGCGATGCTCGCGCAGCAC GGCACCTGCTGGCTCGAAGAAGAAAACTGA
Upstream 100 bases:
>100_bases ACCCCTTGCGGCGGATTGTAGTTAAACTACAATTCAGTGTCAAAAATATTTTTATCGCACTACGGCCCGCGTCGCGGGCA TCCCCAAACGGCGGAGACAC
Downstream 100 bases:
>100_bases TGCAATGCGGCGCGCGGCTGCCGTGCGCGCGCCGCCCGATGTCCCCACGCAATTCAATCCATTCAATAAAGGCAGTCTGG AGGAGAAGTGATCGAGGTTC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLSEAGRIVAVARHAADREGYLQWVEEHVKPHAAKAAGGAFDEAVW RSFLERIVYVKLDLGRAEDYALLRDTVGGLSGIRVFYLATGPSLFVPICKALAAVGLNEGARIVLEKPLGYDLRSSNAIN DAVGEIFAEDQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPVDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKADSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRAGANRLVIRLQPNESIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWRWVEPILNEWARTTKPPKPYAAGTWGPAAASAMLAQH GTCWLEEEN
Sequences:
>Translated_489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLSEAGRIVAVARHAADREGYLQWVEEHVKPHAAKAAGGAFDEAVW RSFLERIVYVKLDLGRAEDYALLRDTVGGLSGIRVFYLATGPSLFVPICKALAAVGLNEGARIVLEKPLGYDLRSSNAIN DAVGEIFAEDQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPVDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKADSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRAGANRLVIRLQPNESIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWRWVEPILNEWARTTKPPKPYAAGTWGPAAASAMLAQH GTCWLEEEN >Mature_489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLSEAGRIVAVARHAADREGYLQWVEEHVKPHAAKAAGGAFDEAVW RSFLERIVYVKLDLGRAEDYALLRDTVGGLSGIRVFYLATGPSLFVPICKALAAVGLNEGARIVLEKPLGYDLRSSNAIN DAVGEIFAEDQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPVDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKADSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRAGANRLVIRLQPNESIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWRWVEPILNEWARTTKPPKPYAAGTWGPAAASAMLAQH GTCWLEEEN
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=492, Percent_Identity=36.5853658536585, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI109389365, Length=492, Percent_Identity=36.5853658536585, Blast_Score=305, Evalue=7e-83, Organism=Homo sapiens, GI52145310, Length=362, Percent_Identity=33.9779005524862, Blast_Score=163, Evalue=3e-40, Organism=Escherichia coli, GI1788158, Length=491, Percent_Identity=43.9918533604888, Blast_Score=431, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17538218, Length=491, Percent_Identity=35.6415478615071, Blast_Score=320, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6324088, Length=488, Percent_Identity=35.0409836065574, Blast_Score=292, Evalue=1e-79, Organism=Drosophila melanogaster, GI24643352, Length=480, Percent_Identity=37.5, Blast_Score=298, Evalue=5e-81, Organism=Drosophila melanogaster, GI24643350, Length=480, Percent_Identity=37.5, Blast_Score=298, Evalue=6e-81, Organism=Drosophila melanogaster, GI221513548, Length=491, Percent_Identity=30.142566191446, Blast_Score=209, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54485; Mature: 54485
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLSEAGRIVAVARHAADREGYLQWVE CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHH EHVKPHAAKAAGGAFDEAVWRSFLERIVYVKLDLGRAEDYALLRDTVGGLSGIRVFYLAT HHCCCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEC GPSLFVPICKALAAVGLNEGARIVLEKPLGYDLRSSNAINDAVGEIFAEDQIYRIDHYLG CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHCC KEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHH LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPVDPRDIGKVAVRGQYHAGVIKGAQVPA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCC YATEPGVKADSQTETFVALKVEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSAL CCCCCCCCCCCCCCEEEEEEEEECCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC GPTALRAGANRLVIRLQPNESIRLYCLAKQPGEGMNLASVHLDLAFDQFFKEGQMEAYQR CCHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHH LLLDVINGRLALFVRRDEQEAAWRWVEPILNEWARTTKPPKPYAAGTWGPAAASAMLAQH HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC GTCWLEEEN CCEEEECCC >Mature Secondary Structure MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLSEAGRIVAVARHAADREGYLQWVE CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHH EHVKPHAAKAAGGAFDEAVWRSFLERIVYVKLDLGRAEDYALLRDTVGGLSGIRVFYLAT HHCCCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEC GPSLFVPICKALAAVGLNEGARIVLEKPLGYDLRSSNAINDAVGEIFAEDQIYRIDHYLG CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHCC KEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHH LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPVDPRDIGKVAVRGQYHAGVIKGAQVPA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCC YATEPGVKADSQTETFVALKVEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSAL CCCCCCCCCCCCCCEEEEEEEEECCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC GPTALRAGANRLVIRLQPNESIRLYCLAKQPGEGMNLASVHLDLAFDQFFKEGQMEAYQR CCHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHH LLLDVINGRLALFVRRDEQEAAWRWVEPILNEWARTTKPPKPYAAGTWGPAAASAMLAQH HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC GTCWLEEEN CCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]