Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813318

Identifier: 237813318

GI number: 237813318

Start: 3000943

End: 3001548

Strand: Direct

Name: 237813318

Synonym: GBP346_A3087

Alternate gene names: NA

Gene position: 3000943-3001548 (Clockwise)

Preceding gene: 237813317

Following gene: 237813321

Centisome position: 73.22

GC content: 54.46

Gene sequence:

>606_bases
ATGGCGTTGAGCCAGGTCCAGCGATCCATCGCGTCGTTACACGAGCAAGCCGCCAAGGCAGGTTTGAACGATCTACTGGA
AATTTCGAGCAAGTCGCCAAACCCAGATGGCGTTGCGCTGAGCGCGTTCAACCTGAAGTTCACAACGCTTAAGTACAACC
GCACCTTCTCCGTTGAAATTGCATTCCAGGCCAGCAAGGTGTTCGAACACGGCGGCCCTTACCGGGAACTGCTTGAGGTT
GATTCCCGAACCGCCAAGCGTGATGTGCGCCTGAAGACGTCAGGCCGACTGCTCAAGTTCAGTTTCCTGAAGACAGAGTT
CCCGCTGCGGCCGGTGACGTATTTCTACGATTGGCTTTACATCAACGCTTTGGTAAAAAATCGTCATTTATGGCCTGCAC
TATCGCGTGCCGAAGGCTTCACTGACATTGTGTTCAACCCATCCAAGTCTCTGAACTGCCAAGCGTATTCGGCGGCACTG
TTTGCGAGTCTCGTGCGTGCGGACAAGCTGAGCAAGGCATTGGAGTCTCCGCAATCGTTTCTTGCGGTCACGAGTGACGC
TTACCGGTTGCGCGAGGAGGAACAGAGTTCGCTCTTCCGTTCGTGA

Upstream 100 bases:

>100_bases
TGGAAGTGAATCGCCCGTGGCAACCCGACCTGTTTTCATACCCTGTTCGTCGACGATCGGTGTACAGGAGGTGCAAGTCG
ATTTTCAGTGGTTCCCAGGC

Downstream 100 bases:

>100_bases
GTCGCTCCATTGCAAAGCAACACCGTCGATGCGCTAAAGAACAGGGCATCCAGCCCCAAAAACCGTACCTATTTTATATG
ATGCCGACCTGCGTAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEV
DSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAAL
FASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS

Sequences:

>Translated_201_residues
MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEV
DSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAAL
FASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS
>Mature_200_residues
ALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEVD
SRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALF
ASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22695; Mature: 22564

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEI
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEE
AFQASKVFEHGGPYRELLEVDSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLY
EEEHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHH
INALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALFASLVRADKLSKALESPQSF
HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
LAVTSDAYRLREEEQSSLFRS
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEI
CHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEE
AFQASKVFEHGGPYRELLEVDSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLY
EEEHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHH
INALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALFASLVRADKLSKALESPQSF
HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
LAVTSDAYRLREEEQSSLFRS
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA