| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is aroA [H]
Identifier: 237813297
GI number: 237813297
Start: 2978224
End: 2980473
Strand: Reverse
Name: aroA [H]
Synonym: GBP346_A3064
Alternate gene names: 237813297
Gene position: 2980473-2978224 (Counterclockwise)
Preceding gene: 237813298
Following gene: 237813296
Centisome position: 72.72
GC content: 70.71
Gene sequence:
>2250_bases GTGTCAGGCTTTTATTTCGACAAACTGGTGATTTTCGGCGTCGGGCTGATCGGCGGCTCGCTCGCGCTCGCGTTGCGCGA AGGCGCGTCGGGCGGCCGGCGCGAGGTGGTGGGCGTCGGCCGCTCGTCGGCGTCGATCGGGCGCGCGCTCGCGTTGCGCG TGATCGATCGCGCGGCGGCGCTCGACGACGATGCGCAACTGCGCGATGCGCTCGCGGGCGCGGACCTCGTGCTGCTCGCC GCGCCCGTCGCTCAGACGGGCCCGCTGCTTGCGCGGATCGCGCCGTTTCTCGATGCATCGACGATCGTCACCGACGCGGG CAGCACGAAATCGGACGTCGTCGCGGCCGCGCGCGCGGCGCTCGGCACGCGGATCGGCCAGTTCGTGCCGGGCCACCCGA TCGCCGGGCGCGAATCGAGCGGCGTCGACGCGGCGCTCGCCGATCTGTACGTCGGCCGCAACGTCGTGCTATGCGCGCTG CCGGAGAACGCGCCCGACGCGCTCGCGCGCGTCGAAGCGATGTGGCGCGCGGCGCGCGCCGACGTGCGCGCGATGAGCGC CGAGCAGCACGACCGCGTGTTCGCGGCGGTGAGCCACCTGCCGCACGTGCTGTCGTTCGCGCTCGTCGAGCAGATTCTCG GCGAATCCGACGCCGAGCTGAAGTTCTCGTATGCGGCGGGCGGTTTCCGCGATTTCACGCGCATCGCCGCGTCGAGCCCC GAAATGTGGCGCGACGTCTGCCTCGCGAACCGCGCGGCGCTCCTCGACGAGCTCGACGCGTACACCGCGGTGCTCGCGCG TCTGCGCGCGGCGATCGACGCGGGTGACGGCGCCGCGCTCGAGACCGTGTTCGCGCGCTCGCGCGCCGCGCGCGCCGCCT GGCGCGAGCGCGGCGCGAAGCCCGCCCCCGCTGTCCGTTCAGACACTTCCGGAACAGGATCTCACATGGAACATCTCGAT CTCGGCCCGTTCTCCCATGCGCAAGGCACGGTGCGCCTGCCCGGCTCGAAGAGCATTTCGAACCGCGTGCTGCTGCTCGC GGCGCTCGCGGAGGGCGAGACGACCGTCACGAACCTGCTCGATTCCGACGATACGCGCGTGATGCTCGATGCGTTGACGA AGCTCGGTGTGAAGCTGTCGCGCGACGGCGGCACCTGCGTCGTCGGCGGCACGCGCGGCGCGTTCACCGCGAAGACCGCC GATCTCTTCCTCGGCAACGCGGGCACCGCGGTGCGGCCGCTGACGGCGGCGCTCGCGGTCAACGGCGGCGAGTACCGGAT TCACGGGGTGCCGCGGATGCACGAGCGCCCGATCGGCGACCTCGTCGACGGGTTGCGCCAGATCGGCGCGCGGATCGACT ACGAGGGCAACGAGGGCTTCCCGCCGCTCAGGATCCGGCCCGCGACGATTTCGGTCGACGCGCCGATCCGCGTGCGCGGC GACGTGTCGAGCCAGTTCCTGACCGCGCTGCTGATGACGCTGCCGCTCGTGAAGGCGAAGGATGGCGCGAGCGTCGTCGA GATCGACGGCGAGCTGATCTCTAAGCCGTACATCGAGATCACGATCAAGCTGATGGCGCGCTTCGGCGTGACGGTGGAGC GCGACGGCTGGCAGCGCTTCACGGTGCCGGCGGGCGTGCGCTACCGGTCGCCCGGCACGATCATGGTCGAGGGCGACGCG TCGTCGGCGTCGTATTTCCTCGCGGCGGGCGCGCTCGGCGGCGGGCCGCTGCGCGTCGAGGGCGTCGGCCGCGCGAGCAT CCAGGGCGACGTCGGCTTCGCGAACGCGCTGATGCAGATGGGCGCGAACGTGACGATGGGCGACGACTGGATCGAGGTGC GCGGCATCGGCCATGACCACGGCAGGCTCGCGCCGATCGACATGGACTTCAACCTGATTCCGGACGCCGCGATGACGATC GCGGTCGTCGCGCTGTTCGCCGACGGCCCGAGCACGCTGCGCAACATCGGCAGCTGGCGCGTGAAGGAGACCGACCGGAT CGCCGCGATGGCCACCGAGCTGCGCAAGGTCGGCGCGACGGTCGAAGAGGGTGCGGACTACCTCGTCGTGACTCCGCCCG CGCAACTCACGCCGAATGCGTCGATCGATACCTACGACGATCACCGGATGGCGATGTGCTTTTCGCTCGTGAGCCTGGGC GGCGTGCCCGTGCGCATCAACGATCCGAAGTGCGTCGGCAAGACGTTCCCCGACTATTTCGACCGTTTCCTCGCGCTCGC GAACGCGTGA
Upstream 100 bases:
>100_bases GCGCGCGCGTGCGCACGCGCGGCGCGCGGCGCGGGCGACCGTTCGATATTGACCTTGCGCGCCCGGGCTCTTCCGGGGCG CGCGTTACTTGGCTCTCGTC
Downstream 100 bases:
>100_bases CGCCCGTATTGACCCACCCGATGAAATCGACTCGACCTTTTCACCCGACCCCAGTTATTACGATCGACGGCCCGACGGCG TCCGGCAAGGGCACCGTCGC
Product: bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MSGFYFDKLVIFGVGLIGGSLALALREGASGGRREVVGVGRSSASIGRALALRVIDRAAALDDDAQLRDALAGADLVLLA APVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGTRIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCAL PENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSP EMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALETVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHMEHLD LGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFTAKTA DLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRG DVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMVEGDA SSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDAAMTI AVVALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLG GVPVRINDPKCVGKTFPDYFDRFLALANA
Sequences:
>Translated_749_residues MSGFYFDKLVIFGVGLIGGSLALALREGASGGRREVVGVGRSSASIGRALALRVIDRAAALDDDAQLRDALAGADLVLLA APVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGTRIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCAL PENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSP EMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALETVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHMEHLD LGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFTAKTA DLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRG DVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMVEGDA SSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDAAMTI AVVALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLG GVPVRINDPKCVGKTFPDYFDRFLALANA >Mature_748_residues SGFYFDKLVIFGVGLIGGSLALALREGASGGRREVVGVGRSSASIGRALALRVIDRAAALDDDAQLRDALAGADLVLLAA PVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGTRIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCALP ENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSPE MWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALETVFARSRAARAAWRERGAKPAPAVRSDTSGTGSHMEHLDL GPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFTAKTAD LFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRGD VSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPGTIMVEGDAS SASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDAAMTIA VVALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLGG VPVRINDPKCVGKTFPDYFDRFLALANA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=437, Percent_Identity=57.4370709382151, Blast_Score=458, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320332, Length=455, Percent_Identity=38.2417582417582, Blast_Score=243, Evalue=8e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 78866; Mature: 78735
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFYFDKLVIFGVGLIGGSLALALREGASGGRREVVGVGRSSASIGRALALRVIDRAAA CCCHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC LDDDAQLRDALAGADLVLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAA CCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH LGTRIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCALPENAPDALARVEAMWRAARA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH DVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH EMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALETVFARSRAARAAWRERGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PAPAVRSDTSGTGSHMEHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLL CCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHH DSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFTAKTADLFLGNAGTAVRPLTAALAV CCCCCCHHHHHHHHCCEEEECCCCEEEECCCCCCCEEEEHHEEECCCCCCHHHHEEEEEE NGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRG CCCCEEEECCCCHHCCCHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEEECCCEEEEC DVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRF CCHHHHHHHHHHHHCCEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEECCCCEEE TVPAGVRYRSPGTIMVEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQM ECCCCEEECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHC GANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDAAMTIAVVALFADGPSTLRNIGSWR CCCCEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCE VKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLG ECCHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GVPVRINDPKCVGKTFPDYFDRFLALANA CEEEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SGFYFDKLVIFGVGLIGGSLALALREGASGGRREVVGVGRSSASIGRALALRVIDRAAA CCHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC LDDDAQLRDALAGADLVLLAAPVAQTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAA CCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH LGTRIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCALPENAPDALARVEAMWRAARA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH DVRAMSAEQHDRVFAAVSHLPHVLSFALVEQILGESDAELKFSYAAGGFRDFTRIAASSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH EMWRDVCLANRAALLDELDAYTAVLARLRAAIDAGDGAALETVFARSRAARAAWRERGAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PAPAVRSDTSGTGSHMEHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLL CCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHH DSDDTRVMLDALTKLGVKLSRDGGTCVVGGTRGAFTAKTADLFLGNAGTAVRPLTAALAV CCCCCCHHHHHHHHCCEEEECCCCEEEECCCCCCCEEEEHHEEECCCCCCHHHHEEEEEE NGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISVDAPIRVRG CCCCEEEECCCCHHCCCHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEEEEECCCEEEEC DVSSQFLTALLMTLPLVKAKDGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRF CCHHHHHHHHHHHHCCEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHCCEEECCCCEEE TVPAGVRYRSPGTIMVEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQM ECCCCEEECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHC GANVTMGDDWIEVRGIGHDHGRLAPIDMDFNLIPDAAMTIAVVALFADGPSTLRNIGSWR CCCCEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCE VKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTPNASIDTYDDHRMAMCFSLVSLG ECCHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GVPVRINDPKCVGKTFPDYFDRFLALANA CEEEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA