Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813293

Identifier: 237813293

GI number: 237813293

Start: 2974796

End: 2975317

Strand: Reverse

Name: 237813293

Synonym: GBP346_A3060

Alternate gene names: NA

Gene position: 2975317-2974796 (Counterclockwise)

Preceding gene: 237813294

Following gene: 237813292

Centisome position: 72.59

GC content: 64.18

Gene sequence:

>522_bases
GTGACGGTGCTGTCGCAGCCGAGGTCGAAGCCAGCATGGCTGAAAGAAGGCGCCCCGCAAGGGGCGCTTTTTCTTTGGCG
CGCGCCGCGCGCGTTTCGCGAAGCGCGTCAAGCGCCGCGCAAGCGATTCACGAAGCGCGAAACGCTTCCTTTACAATACG
GGGCGCCCGAGGCGCTGCGAAGGGGAGTCGCTGCGCCGCCGAACAATCTCAGTCAAAGAGAGGGAGTCATGAAGTTCATC
GTCTGGTTGATCCGCGTGCTGGTGTTCGTGTTGCTGCTCGTGCTTGCGTTGGCCAATACGCAAAGCGCGACGCTGAATTT
CCTCGCCGGCTACAACTGGCAGGCTCCGCTGATCCTGATCGGTCTCGCGTTCTTCGGCGTCGGGCTGATCGCGGGCCTGC
TGTCGGCGCTGCCCGCGATCTTCCGGATGCGGATGGAAAACGGCCGGCTCAAGCGCGACTTGCGCGCTGTGCGCGAGAAC
CCGGCCGTCGTCGACCAGCCGCCGATGCCGCCCGTCATTTAA

Upstream 100 bases:

>100_bases
AGAAGCACGTGCCGCACTTCAAGCCCGGCAAGGAATTGCGCGAGCGCGTCGATGGCCGCGCCGGCGAGCCGTTGAAGAAC
GACGAGCCGGAAGACGCGCA

Downstream 100 bases:

>100_bases
CGATGCCGACGCCGCGCACGCCGCGCGGCCCCGGTTTTTTTCGACACGTCGCATGGATCTCGATTTCTGGTGGCTGCTCG
CCATTCCCGTCGCGTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFI
VWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVREN
PAVVDQPPMPPVI

Sequences:

>Translated_173_residues
MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFI
VWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVREN
PAVVDQPPMPPVI
>Mature_172_residues
TVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFIV
WLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENP
AVVDQPPMPPVI

Specific function: Unknown

COG id: COG5416

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19317; Mature: 19186

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALR
CCCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RGVAAPPNNLSQREGVMKFIVWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHH
GLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENPAVVDQPPMPPVI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALR
CCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RGVAAPPNNLSQREGVMKFIVWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHH
GLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENPAVVDQPPMPPVI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA