Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 237813122

GI number: 237813122

Start: 2815883

End: 2817118

Strand: Direct

Name: sufB [C]

Synonym: GBP346_A2884

Alternate gene names: 237813122

Gene position: 2815883-2817118 (Clockwise)

Preceding gene: 237813121

Following gene: 237813123

Centisome position: 68.7

GC content: 73.06

Gene sequence:

>1236_bases
ATGACGACGACCGCCACCGACCGGGCCGCCGCGCGAGCCCAACTCGCGCAACACGGCTGGATCTCGCGCCACCACGAATC
GTTCCGCCATCTGCCGCCGCCCGCGGCCGATACATGGCTCGACGCCGAAGCCGACCGAGCGGACGCGGCGCGCCCGCCGG
GCGCCGCCGCGCACGCCGCCTGGCTGCTCGCGCCCGTCGGCTCCGGCTCGCTCGAACAGGTCGACGCATGCTGGCTCGGC
ACCGCGGATCGCGCCGAGCGCGCCGCGTTGTTCGCGGACTTGCCGACGTCGCCGGACGATGACGCCGCGCCGTTTTTCTG
GGCGCATCGCGCGCTGTGCGAAACGGGCTTGCGACTGCGCATCGGCAGCGGCCCTGCGCAGCACGCGCCCACGATGCTGC
AACTGCGGCTGCCGGCGCAGGGGCGCGCCGAAGCGCCGCTCGTCGTGATCGACGTCATGCCGGGCGTGCATTGCGTGCTC
GTGGAGTCTCACGAGCACGCCGCCGGCCGCGACGCGCCGCTCACGCAGAATCTGCACGCGTATGTTCGGCTCGGCGCCGG
CGCGTCGCTCGACCATCTGCGCATCGCCACGCCGGGCGCGCGCGATCGGATCGCGCATCACGTGCACGTGTGCCTTCAGC
GCGACGCGCAATACCGGCAATCGCTGCTCGCGTCGGGCAGCGAATACCACCTGCAACGCACGGTGCTCGAACTGCGCGGC
GAACGCGCCGTGGCCCGCGCATCCGGCGTGTTGTTCGCGTCGTCGCAAGCGAAGCTCGAGCAGCAGGTACGCGCGGCGCA
CGCGGCGCCGCGCACGCGAAGCGCGATCGACACGCTCGCGCTCGCGAGCGGCCATGCGCAGATCGTCGCGAATGCGTTCT
CGTCGATCGCCGCGGGCGCGTCGGGAGCCGATCTGCGGCAGCGCCTGAGCGGCATTCCGACGAGCGGCGAGCCGCGCGTC
GTGCTGCGGCCGCACCTCGAAATCCATCACGACGATGTGCAGGCCGCGCATGGCGCGACGTGGGGCGCGTTGCCCGAGGA
CGCGCTCTTCTATGCCTGCCAGCGCGGGCTCGACCGCCGCGATGCGCTGGCGATGATCGTCGCGGGCATGGCGCGCGCGG
CGCTCGCGCACGGCATCGACACGCCGGGCAGGCTGGAAGCGCTCGGCGGCGACGCGCTGCTCGCGCGCGAAGTCTCGCGG
CATCTCGCCGAACAAACGGAGGCACGCCATGGGTGA

Upstream 100 bases:

>100_bases
GATCGCGGGCGCATCGCCGAATCCGGCGATCTCGCACTCGCCCGCGACATCGCGGCCAAGGGCTTCGCGCGCTCGGACGC
ACTCGCGCAGGCCTGAAGCG

Downstream 100 bases:

>100_bases
CATGCTGCGTTCGGCCACGATGATGGCGAGCGCGTTTCCGGCGCTTGCGCAGCGCGTGAACGGCGCGCCGCTCGCGTATC
TCGACAACGCGGCGACGACG

Product: SufB/sufD domain protein

Products: NA

Alternate protein names: SufD Domain-Containing Protein; SufD Protein; Fes Assembly Protein Sufd; Component Of SufBCD Complex; ABC Transporter Permease Component; Fe-S Cluster Assembly Protein; SufD Needed For FhuF Fe-S Center Production/Stability; Sufbd Protein

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTTTATDRAAARAQLAQHGWISRHHESFRHLPPPAADTWLDAEADRADAARPPGAAAHAAWLLAPVGSGSLEQVDACWLG
TADRAERAALFADLPTSPDDDAAPFFWAHRALCETGLRLRIGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGVHCVL
VESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDAQYRQSLLASGSEYHLQRTVLELRG
ERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRV
VLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAREVSR
HLAEQTEARHG

Sequences:

>Translated_411_residues
MTTTATDRAAARAQLAQHGWISRHHESFRHLPPPAADTWLDAEADRADAARPPGAAAHAAWLLAPVGSGSLEQVDACWLG
TADRAERAALFADLPTSPDDDAAPFFWAHRALCETGLRLRIGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGVHCVL
VESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDAQYRQSLLASGSEYHLQRTVLELRG
ERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRV
VLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAREVSR
HLAEQTEARHG
>Mature_410_residues
TTTATDRAAARAQLAQHGWISRHHESFRHLPPPAADTWLDAEADRADAARPPGAAAHAAWLLAPVGSGSLEQVDACWLGT
ADRAERAALFADLPTSPDDDAAPFFWAHRALCETGLRLRIGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGVHCVLV
ESHEHAAGRDAPLTQNLHAYVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDAQYRQSLLASGSEYHLQRTVLELRGE
RAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAIDTLALASGHAQIVANAFSSIAAGASGADLRQRLSGIPTSGEPRVV
LRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRRDALAMIVAGMARAALAHGIDTPGRLEALGGDALLAREVSRH
LAEQTEARHG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787971, Length=191, Percent_Identity=24.6073298429319, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43746; Mature: 43614

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTATDRAAARAQLAQHGWISRHHESFRHLPPPAADTWLDAEADRADAARPPGAAAHAA
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
WLLAPVGSGSLEQVDACWLGTADRAERAALFADLPTSPDDDAAPFFWAHRALCETGLRLR
EEEEECCCCCHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
IGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGVHCVLVESHEHAAGRDAPLTQNLHA
ECCCCCHHCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEE
YVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDAQYRQSLLASGSEYHLQRTVLELRG
EEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
ERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAIDTLALASGHAQIVANAFSSIAAGA
CHHHHHHCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
SGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRR
CCHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCHH
DALAMIVAGMARAALAHGIDTPGRLEALGGDALLAREVSRHLAEQTEARHG
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTTATDRAAARAQLAQHGWISRHHESFRHLPPPAADTWLDAEADRADAARPPGAAAHAA
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
WLLAPVGSGSLEQVDACWLGTADRAERAALFADLPTSPDDDAAPFFWAHRALCETGLRLR
EEEEECCCCCHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
IGSGPAQHAPTMLQLRLPAQGRAEAPLVVIDVMPGVHCVLVESHEHAAGRDAPLTQNLHA
ECCCCCHHCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEE
YVRLGAGASLDHLRIATPGARDRIAHHVHVCLQRDAQYRQSLLASGSEYHLQRTVLELRG
EEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
ERAVARASGVLFASSQAKLEQQVRAAHAAPRTRSAIDTLALASGHAQIVANAFSSIAAGA
CHHHHHHCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
SGADLRQRLSGIPTSGEPRVVLRPHLEIHHDDVQAAHGATWGALPEDALFYACQRGLDRR
CCHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCHH
DALAMIVAGMARAALAHGIDTPGRLEALGGDALLAREVSRHLAEQTEARHG
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA