Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237813112

Identifier: 237813112

GI number: 237813112

Start: 2805835

End: 2807205

Strand: Direct

Name: 237813112

Synonym: GBP346_A2875

Alternate gene names: NA

Gene position: 2805835-2807205 (Clockwise)

Preceding gene: 237813104

Following gene: 237813116

Centisome position: 68.46

GC content: 72.79

Gene sequence:

>1371_bases
ATGCGCCGGCCCGCTCCGCGCGCGATGCGCCCCGCCGCCCGCCTTCATTTCGCCATGCAGCGCAAGCTCGAACTCGATCA
CTCCCCCGCGCTGAGCGTGCCGCTGCGCTTTTTCGTCAGCGCGCCGCTCTTCGCGCTCGCCGCGGCGGGCCTGCTGCTGT
GGGCGGGGCCGGATACGCTCGCGTCGCGCTGGTCGCCCGCGGCGCTCGCGCTCACGCATCTGTGCGCGCTCGGCATGCTC
GCGACGACGATGGTCGGCGCGATGATCCAGATCATGTCGGTCGCCGCCGGCATCCGGATCGCCGCGCCCGTCGCGAGCGC
CACCGCGATCCACGCATGCCTCACGCTCGGCACGCTGCTGCTCGCGGCGGCATTCGCGTGCGCGGCGCCCGTGTTGTTCG
CCCCCGCCGCGCTGCTGCTCGGCGCGGCGTTCGCGTGGTTTCTGCTCGTCTGCGCGATCGGCTTCGCGCGTGAGCGGCGG
CGCATGCCGGCGGGCGCCGCCGCCGTGCTGCGCACCGTGCGCCTCGCGTGGCTCGCGCTCGCGGCGACCGTCGCGCTCGG
CGCATCGCTCGGGTTCGCGCTCGGCGGGCATCTGCCCGTCTTCTCGGTCGAGCTCGTCGATCTGCACGCGGCCTGGGGGC
TGGCCGGATGGGTCGGGCTGCTGACGATCGGCATCTCGTACCAGCTGATTCCGATGTTTCAGGCGACCGAGCCCTATCCG
CGCGCCGTCGCGCGCGGGCTCGGCCCGGGCGTGTTCGCGGCGCTCGTCGCGGCTTCGGCCGTCACGTTCGGCCCGGCCGG
CCGCGCCGGTTTCGCCGCCGACGCGATTCGGCTCGCGCTATACGTGCTGTACGCCGCGTTCGCGGCATGGACGTTCCATC
TGCTCCGTACGCGCAAGCGCCCCGAGGCCGATACGACGACGCTGTTCTGGCGCACCGCGACGGCAAGCGTCGCAGGCGCG
GGCGCGCTGTGGATCGCGAACGCGGGCATGGGCGGCCGCGACATCGCGGTCACGACCGGCGTGCTGCTGATGATGGGCGG
CGCGTGGTCGGCGATCAACGGGATGCTCTACAAGATCATCCCGTTCCTGCTGTGGTACCACGCGCAAAAGTCGAGCGAGA
CGGCGATTCCCGGAATGCCGAAGGTCAAGGAGATGCTGCCGGAACGCGTCGCGCGCCCGCAATTTTTCGCGCACGTCGCC
GCGCTGCTGCTGCTCGTCGCCGCGAGCGTCGCGCCCGCGCCGTTCGCGCGGCCGGCCGCCGTCGCGCTCGGCGTGTCGGC
CGGCTGGCTCGCGCTCAACATGTTCGGCGCCTGGCGGCGCTATGCGCGCGTTCGGCGGCGCGTCACGTCAGTACTGCATC
TCCAAGCGTAA

Upstream 100 bases:

>100_bases
GCCTTAATCGGCGTCAAGGTCTCGGTCCGGATCGCGCGCCGATCCGGGGTTATGATCAGAATACCGAAACATGGGTGCGT
CGCGTCGCCGCGCGTCGGCC

Downstream 100 bases:

>100_bases
CCGGTCGACGTCGGGAATGAAGATGTCGCGGCCATTGACGACGACGAGCTCGCGCGTGCAGAGATCGCGCAGCACGCGCG
AGAAGTGCTCGGGCGTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML
ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR
RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP
RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA
GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA
ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA

Sequences:

>Translated_456_residues
MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML
ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR
RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP
RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA
GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA
ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA
>Mature_456_residues
MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML
ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR
RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP
RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA
GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA
ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47964; Mature: 47964

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHH
ASRWSPAALALTHLCALGMLATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERRRMPAGAAAVLRTVRLAWLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHH
RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKR
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEADTTTLFWRTATASVAGAGALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKII
CCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
PFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVAALLLLVAASVAPAPFARPAA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHH
ASRWSPAALALTHLCALGMLATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERRRMPAGAAAVLRTVRLAWLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHH
RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKR
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEADTTTLFWRTATASVAGAGALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKII
CCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
PFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVAALLLLVAASVAPAPFARPAA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]