| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813112
Identifier: 237813112
GI number: 237813112
Start: 2805835
End: 2807205
Strand: Direct
Name: 237813112
Synonym: GBP346_A2875
Alternate gene names: NA
Gene position: 2805835-2807205 (Clockwise)
Preceding gene: 237813104
Following gene: 237813116
Centisome position: 68.46
GC content: 72.79
Gene sequence:
>1371_bases ATGCGCCGGCCCGCTCCGCGCGCGATGCGCCCCGCCGCCCGCCTTCATTTCGCCATGCAGCGCAAGCTCGAACTCGATCA CTCCCCCGCGCTGAGCGTGCCGCTGCGCTTTTTCGTCAGCGCGCCGCTCTTCGCGCTCGCCGCGGCGGGCCTGCTGCTGT GGGCGGGGCCGGATACGCTCGCGTCGCGCTGGTCGCCCGCGGCGCTCGCGCTCACGCATCTGTGCGCGCTCGGCATGCTC GCGACGACGATGGTCGGCGCGATGATCCAGATCATGTCGGTCGCCGCCGGCATCCGGATCGCCGCGCCCGTCGCGAGCGC CACCGCGATCCACGCATGCCTCACGCTCGGCACGCTGCTGCTCGCGGCGGCATTCGCGTGCGCGGCGCCCGTGTTGTTCG CCCCCGCCGCGCTGCTGCTCGGCGCGGCGTTCGCGTGGTTTCTGCTCGTCTGCGCGATCGGCTTCGCGCGTGAGCGGCGG CGCATGCCGGCGGGCGCCGCCGCCGTGCTGCGCACCGTGCGCCTCGCGTGGCTCGCGCTCGCGGCGACCGTCGCGCTCGG CGCATCGCTCGGGTTCGCGCTCGGCGGGCATCTGCCCGTCTTCTCGGTCGAGCTCGTCGATCTGCACGCGGCCTGGGGGC TGGCCGGATGGGTCGGGCTGCTGACGATCGGCATCTCGTACCAGCTGATTCCGATGTTTCAGGCGACCGAGCCCTATCCG CGCGCCGTCGCGCGCGGGCTCGGCCCGGGCGTGTTCGCGGCGCTCGTCGCGGCTTCGGCCGTCACGTTCGGCCCGGCCGG CCGCGCCGGTTTCGCCGCCGACGCGATTCGGCTCGCGCTATACGTGCTGTACGCCGCGTTCGCGGCATGGACGTTCCATC TGCTCCGTACGCGCAAGCGCCCCGAGGCCGATACGACGACGCTGTTCTGGCGCACCGCGACGGCAAGCGTCGCAGGCGCG GGCGCGCTGTGGATCGCGAACGCGGGCATGGGCGGCCGCGACATCGCGGTCACGACCGGCGTGCTGCTGATGATGGGCGG CGCGTGGTCGGCGATCAACGGGATGCTCTACAAGATCATCCCGTTCCTGCTGTGGTACCACGCGCAAAAGTCGAGCGAGA CGGCGATTCCCGGAATGCCGAAGGTCAAGGAGATGCTGCCGGAACGCGTCGCGCGCCCGCAATTTTTCGCGCACGTCGCC GCGCTGCTGCTGCTCGTCGCCGCGAGCGTCGCGCCCGCGCCGTTCGCGCGGCCGGCCGCCGTCGCGCTCGGCGTGTCGGC CGGCTGGCTCGCGCTCAACATGTTCGGCGCCTGGCGGCGCTATGCGCGCGTTCGGCGGCGCGTCACGTCAGTACTGCATC TCCAAGCGTAA
Upstream 100 bases:
>100_bases GCCTTAATCGGCGTCAAGGTCTCGGTCCGGATCGCGCGCCGATCCGGGGTTATGATCAGAATACCGAAACATGGGTGCGT CGCGTCGCCGCGCGTCGGCC
Downstream 100 bases:
>100_bases CCGGTCGACGTCGGGAATGAAGATGTCGCGGCCATTGACGACGACGAGCTCGCGCGTGCAGAGATCGCGCAGCACGCGCG AGAAGTGCTCGGGCGTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA
Sequences:
>Translated_456_residues MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA >Mature_456_residues MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTLASRWSPAALALTHLCALGML ATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLLLAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERR RMPAGAAAVLRTVRLAWLALAATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKRPEADTTTLFWRTATASVAGA GALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKIIPFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVA ALLLLVAASVAPAPFARPAAVALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47964; Mature: 47964
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHH ASRWSPAALALTHLCALGMLATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERRRMPAGAAAVLRTVRLAWLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHH RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKR HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEADTTTLFWRTATASVAGAGALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKII CCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH PFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVAALLLLVAASVAPAPFARPAA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH VALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRPAPRAMRPAARLHFAMQRKLELDHSPALSVPLRFFVSAPLFALAAAGLLLWAGPDTL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHH ASRWSPAALALTHLCALGMLATTMVGAMIQIMSVAAGIRIAAPVASATAIHACLTLGTLL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LAAAFACAAPVLFAPAALLLGAAFAWFLLVCAIGFARERRRMPAGAAAVLRTVRLAWLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AATVALGASLGFALGGHLPVFSVELVDLHAAWGLAGWVGLLTIGISYQLIPMFQATEPYP HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCHH RAVARGLGPGVFAALVAASAVTFGPAGRAGFAADAIRLALYVLYAAFAAWTFHLLRTRKR HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEADTTTLFWRTATASVAGAGALWIANAGMGGRDIAVTTGVLLMMGGAWSAINGMLYKII CCCCCEEEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH PFLLWYHAQKSSETAIPGMPKVKEMLPERVARPQFFAHVAALLLLVAASVAPAPFARPAA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH VALGVSAGWLALNMFGAWRRYARVRRRVTSVLHLQA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]