Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237813104

Identifier: 237813104

GI number: 237813104

Start: 2800449

End: 2801132

Strand: Direct

Name: 237813104

Synonym: GBP346_A2866

Alternate gene names: NA

Gene position: 2800449-2801132 (Clockwise)

Preceding gene: 237813103

Following gene: 237813112

Centisome position: 68.33

GC content: 71.49

Gene sequence:

>684_bases
GTGGGCGGGCTCGTCCCGTTCACCGCGACCGACTATCCCGGCCAGTTCGCCGCGGTCGTGTTCGTGCAGGGTTGCCCATG
GCGTTGCGGCTATTGCCACAATCCGCACCTGCAGCCGCGCTCGCAGCCGGCCGAGATCGAATGGGACGCGCTGCTCGCGT
TCCTCGCGCGCCGCGTCGGGCTGATCGACGCGGTCGTGTTCAGCGGCGGCGAGCCGTCGATCGATCCGGCGCTCGCCGCG
TCGATCCACGATGTCCGGCGGCTCGGCTTCAAGGTCGGCCTGCACAGCGCGGGCACGCATCCGCGGCGGCTCGCCCATCT
GCTGCCGTCGCTCGACTGGATCGGGCTCGACGTGAAGGCGCCGTTCGACGACTACGCGCACACGACGCGCGTGCGCGCAA
GCGGCGGCCATGCGCGGCAGAGCCTCGAAGCGGTGCTCGCGAGCGGCATCGCGTACGAATGCCGAACGACCGCGCACCCG
GATCTGCTGCCCGAGCCGGCGCTGCTGCGCGTCGCGCACGAACTCGCCGATCTCGGCGTCGAGCATTACGTGTTGCAGGT
GTTCCGGGCGCAAGGCTGCGGCAGCGGCGCGCTGAACGCGGCATCGCTCGCCGGCTATCCGAGCGACGCGGTGCTCGGCC
GGCTCGATCGGCTGTTCGCGAACTTCGCGATCCGGCGCGGGTGA

Upstream 100 bases:

>100_bases
CCGCGAACGCGCGACGGACGAGGCCGCGCTGCGCGCGGCGGCTTGAGCACGGCCCGCCCACGCGATGAACCTCGCCCTCC
CCCGGCGGCGTCCACTCAAG

Downstream 100 bases:

>100_bases
GCCGGCGCGCTTCGGCCGCCTGTTCCGGGGCTCGTTCGGCCGCTCGCTCAACAGCTCATTCAGCACCTTATTCGGCACCT
TACCCGGCGCAATCGCATTT

Product: anaerobic ribonucleoside-triphosphate reductase activating protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAA
SIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHP
DLLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG

Sequences:

>Translated_227_residues
MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAA
SIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHP
DLLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG
>Mature_226_residues
GGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAAS
IHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPD
LLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR012840
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 24404; Mature: 24273

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVG
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIDAVVFSGGEPSIDPALAASIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECC
PFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPDLLPEPALLRVAHELADLGV
CCHHHHHHHEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCH
EHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG
HHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVG
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIDAVVFSGGEPSIDPALAASIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECC
PFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPDLLPEPALLRVAHELADLGV
CCHHHHHHHEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCH
EHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG
HHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]