| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813104
Identifier: 237813104
GI number: 237813104
Start: 2800449
End: 2801132
Strand: Direct
Name: 237813104
Synonym: GBP346_A2866
Alternate gene names: NA
Gene position: 2800449-2801132 (Clockwise)
Preceding gene: 237813103
Following gene: 237813112
Centisome position: 68.33
GC content: 71.49
Gene sequence:
>684_bases GTGGGCGGGCTCGTCCCGTTCACCGCGACCGACTATCCCGGCCAGTTCGCCGCGGTCGTGTTCGTGCAGGGTTGCCCATG GCGTTGCGGCTATTGCCACAATCCGCACCTGCAGCCGCGCTCGCAGCCGGCCGAGATCGAATGGGACGCGCTGCTCGCGT TCCTCGCGCGCCGCGTCGGGCTGATCGACGCGGTCGTGTTCAGCGGCGGCGAGCCGTCGATCGATCCGGCGCTCGCCGCG TCGATCCACGATGTCCGGCGGCTCGGCTTCAAGGTCGGCCTGCACAGCGCGGGCACGCATCCGCGGCGGCTCGCCCATCT GCTGCCGTCGCTCGACTGGATCGGGCTCGACGTGAAGGCGCCGTTCGACGACTACGCGCACACGACGCGCGTGCGCGCAA GCGGCGGCCATGCGCGGCAGAGCCTCGAAGCGGTGCTCGCGAGCGGCATCGCGTACGAATGCCGAACGACCGCGCACCCG GATCTGCTGCCCGAGCCGGCGCTGCTGCGCGTCGCGCACGAACTCGCCGATCTCGGCGTCGAGCATTACGTGTTGCAGGT GTTCCGGGCGCAAGGCTGCGGCAGCGGCGCGCTGAACGCGGCATCGCTCGCCGGCTATCCGAGCGACGCGGTGCTCGGCC GGCTCGATCGGCTGTTCGCGAACTTCGCGATCCGGCGCGGGTGA
Upstream 100 bases:
>100_bases CCGCGAACGCGCGACGGACGAGGCCGCGCTGCGCGCGGCGGCTTGAGCACGGCCCGCCCACGCGATGAACCTCGCCCTCC CCCGGCGGCGTCCACTCAAG
Downstream 100 bases:
>100_bases GCCGGCGCGCTTCGGCCGCCTGTTCCGGGGCTCGTTCGGCCGCTCGCTCAACAGCTCATTCAGCACCTTATTCGGCACCT TACCCGGCGCAATCGCATTT
Product: anaerobic ribonucleoside-triphosphate reductase activating protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAA SIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHP DLLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG
Sequences:
>Translated_227_residues MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAA SIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHP DLLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG >Mature_226_residues GGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFSGGEPSIDPALAAS IHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKAPFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPD LLPEPALLRVAHELADLGVEHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR012840 - InterPro: IPR001989 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 24404; Mature: 24273
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVG CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LIDAVVFSGGEPSIDPALAASIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECC PFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPDLLPEPALLRVAHELADLGV CCHHHHHHHEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCH EHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG HHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GGLVPFTATDYPGQFAAVVFVQGCPWRCGYCHNPHLQPRSQPAEIEWDALLAFLARRVG CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LIDAVVFSGGEPSIDPALAASIHDVRRLGFKVGLHSAGTHPRRLAHLLPSLDWIGLDVKA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECC PFDDYAHTTRVRASGGHARQSLEAVLASGIAYECRTTAHPDLLPEPALLRVAHELADLGV CCHHHHHHHEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCH EHYVLQVFRAQGCGSGALNAASLAGYPSDAVLGRLDRLFANFAIRRG HHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]