| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813070
Identifier: 237813070
GI number: 237813070
Start: 2767982
End: 2768782
Strand: Reverse
Name: 237813070
Synonym: GBP346_A2832
Alternate gene names: NA
Gene position: 2768782-2767982 (Counterclockwise)
Preceding gene: 237813071
Following gene: 237813068
Centisome position: 67.55
GC content: 59.93
Gene sequence:
>801_bases ATGCCCGACAACAGTGGCCTGACTGAGGATGGATTCCGGCCTGAATTTTCCGATAGCGGGGTGAAGAAAATGTGGGGAGT GGAAGCGAAAGACTGGGTGACGGTTGGAGCTACGGTTGCCGGGCCGATCCTCGCAGTGCAGGCGCAAAAGTGGGTCGAGC GCGCTCGCGCATCGGTGCAACGTCGAGATTGGATCTTCAGCACTCTGATGGCGACCCGACAAGACCGCGTCTCAATGGAG CATGTGCGCGCGCTGAACATGATCGACCTCGCGTTCTACGGTAGGCGTGTGCTCGGCAAGGTATGGCGCAGCAAGGGCTC GCAGGCGGTTCTCGATGCATGGCACGACTACCATGCTCACCTGACGATTCCTGTGCAAAATCGGCCGGCAAACGAAGGCG AGCAACGCGACTGGAACGGTCGCTGTGACGAGCTGTTCACCAACCTGCTCGATCGGCTCGCCGCAGTCATGAGCTACAAG TTTGAGCGCGCAGCGCTGAAAGGCGGTAGCTATTCGCCTGAAGCGCATGGCACGGTCGCGTTACAGCAGCAGGCCATACG CCATCTGGCAATCGAGGTACTCGCCGGCAACAAGAATCTGCCGATGGAGGTCAAGGCATGGCCTGTCGATGCCGCCGTCG CTGAACAGCAGCGCAACACGCAGGCCGAGCTAGTCCAGAACCAGAGGGAAATGATGGGTGACTTTAAGCAGATCCTGGAG CGGCTCGCCGAGCATGCTGTTGGCCCTCGCGCAGAAGCATTAGCGCCCGCTGAACCTGAGGCACGAATCAATGGCCGTTG A
Upstream 100 bases:
>100_bases GCGGGGCGAATTTCCGGAACGAGAGAAATGGTGGTGCATCACAACTACATTGTCGTGTACAGCGTTGATGCGGACTTGGT AGAGGTTCTGAACGTGAAGC
Downstream 100 bases:
>100_bases TGGCCGAATGCCTGCCTCGCGTTCCCGTCGATGAACAAAAAAGCCCTGCGAGTGCAGGGCTTTTTTTTTGCCTAGTGGCT TTGCGCTGGCGCCGGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPDNSGLTEDGFRPEFSDSGVKKMWGVEAKDWVTVGATVAGPILAVQAQKWVERARASVQRRDWIFSTLMATRQDRVSME HVRALNMIDLAFYGRRVLGKVWRSKGSQAVLDAWHDYHAHLTIPVQNRPANEGEQRDWNGRCDELFTNLLDRLAAVMSYK FERAALKGGSYSPEAHGTVALQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFKQILE RLAEHAVGPRAEALAPAEPEARINGR
Sequences:
>Translated_266_residues MPDNSGLTEDGFRPEFSDSGVKKMWGVEAKDWVTVGATVAGPILAVQAQKWVERARASVQRRDWIFSTLMATRQDRVSME HVRALNMIDLAFYGRRVLGKVWRSKGSQAVLDAWHDYHAHLTIPVQNRPANEGEQRDWNGRCDELFTNLLDRLAAVMSYK FERAALKGGSYSPEAHGTVALQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFKQILE RLAEHAVGPRAEALAPAEPEARINGR >Mature_265_residues PDNSGLTEDGFRPEFSDSGVKKMWGVEAKDWVTVGATVAGPILAVQAQKWVERARASVQRRDWIFSTLMATRQDRVSMEH VRALNMIDLAFYGRRVLGKVWRSKGSQAVLDAWHDYHAHLTIPVQNRPANEGEQRDWNGRCDELFTNLLDRLAAVMSYKF ERAALKGGSYSPEAHGTVALQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFKQILER LAEHAVGPRAEALAPAEPEARINGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29849; Mature: 29718
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNSGLTEDGFRPEFSDSGVKKMWGVEAKDWVTVGATVAGPILAVQAQKWVERARASVQ CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHH RRDWIFSTLMATRQDRVSMEHVRALNMIDLAFYGRRVLGKVWRSKGSQAVLDAWHDYHAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE LTIPVQNRPANEGEQRDWNGRCDELFTNLLDRLAAVMSYKFERAALKGGSYSPEAHGTVA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFKQILE HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH RLAEHAVGPRAEALAPAEPEARINGR HHHHHCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure PDNSGLTEDGFRPEFSDSGVKKMWGVEAKDWVTVGATVAGPILAVQAQKWVERARASVQ CCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHH RRDWIFSTLMATRQDRVSMEHVRALNMIDLAFYGRRVLGKVWRSKGSQAVLDAWHDYHAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE LTIPVQNRPANEGEQRDWNGRCDELFTNLLDRLAAVMSYKFERAALKGGSYSPEAHGTVA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFKQILE HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH RLAEHAVGPRAEALAPAEPEARINGR HHHHHCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA