| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812991
Identifier: 237812991
GI number: 237812991
Start: 2679521
End: 2680339
Strand: Reverse
Name: 237812991
Synonym: GBP346_A2751
Alternate gene names: NA
Gene position: 2680339-2679521 (Counterclockwise)
Preceding gene: 237812995
Following gene: 237812990
Centisome position: 65.4
GC content: 71.79
Gene sequence:
>819_bases TTGCGCTGCGCGCGAAGCGCCGCACTCGCCGCGCTGGGCGAATCCGATCCCGCGCGCAAGGTCGCGCTCGTCGCCGAATT GCATGCGGCGCTCGCCGACGGCCGCGCAGCCGTGTTTCCGGAGCGCGAGTTGAGCGCGCCGGCGCGCGGCGTGCCCGGGC GGCCAGCTCGCCCGGAGCTCGTCGAGCCGCGCCGGCTCGAGCGGCGCAGCATGCGCTCGCCGCAGGGGCGGGCCGTGCTG CTGCATGCGCTCGCGCACATCGAATTCAACGCGATCAATCTCGCGCTCGACGCGGTGTGGCGCTTCGCGCGGATGCCCAC GGCGTTCTATGCGGACTGGCTGAAAGTGGCCGCGGAGGAGGCGCATCACTTCTCGCTGCTCGCCGCGCGCCTTGCCGAGT TCGGGCACGCGTACGGCGATTTTCCGGCGCACGACGGCCTCTGGGAAATGTGCGAGCGGACCGCGGGCGACGTGCTCGCG AGGATGGCGCTCGTGCCGCGCACGCTGGAGGCGCGCGGGCTCGACGCGTCGCCGCCGATCCGCGCGCGGCTGCAGCAGGC GGGCGATCATGCGTCGGCGGCGATTCTCGACGTGATCCTGCGCGACGAGATCGGCCATGTATGGATCGGCAATCGCTGGT TTCGCCATCTGTGCGATGCGGCCGGGCTCGATCCGCATCCGACTTACGAACGGCTCGCCGGACAGTATCGGGCGCCCCGG CTGCGCGGGCCGTTCAATTTCGACGCGCGGCGCGCCGCGGGCTTCAACGACGACGAATTGAACGCGCTCGTCGCGCAGGA CGCCGACCCGAACGGATGA
Upstream 100 bases:
>100_bases ATCCTTTATTGTAAACGGTTGTTCCGGTCGCTCGCGCGCGTGCCGCGCGCGGGCATGTCGTCCCGTCATGTCATCCGTCC CGATTTCATCGTCCGAGCCG
Downstream 100 bases:
>100_bases GGCGGGCGCGCCGCGTGCCGGACCGCGGCCGCGCTTCGTTCGCGCGGGCCGCGCCTAGAGAAGTGCCTCGACACGCGTGC GGCATCGCGGCTCGCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRCARSAALAALGESDPARKVALVAELHAALADGRAAVFPERELSAPARGVPGRPARPELVEPRRLERRSMRSPQGRAVL LHALAHIEFNAINLALDAVWRFARMPTAFYADWLKVAAEEAHHFSLLAARLAEFGHAYGDFPAHDGLWEMCERTAGDVLA RMALVPRTLEARGLDASPPIRARLQQAGDHASAAILDVILRDEIGHVWIGNRWFRHLCDAAGLDPHPTYERLAGQYRAPR LRGPFNFDARRAAGFNDDELNALVAQDADPNG
Sequences:
>Translated_272_residues MRCARSAALAALGESDPARKVALVAELHAALADGRAAVFPERELSAPARGVPGRPARPELVEPRRLERRSMRSPQGRAVL LHALAHIEFNAINLALDAVWRFARMPTAFYADWLKVAAEEAHHFSLLAARLAEFGHAYGDFPAHDGLWEMCERTAGDVLA RMALVPRTLEARGLDASPPIRARLQQAGDHASAAILDVILRDEIGHVWIGNRWFRHLCDAAGLDPHPTYERLAGQYRAPR LRGPFNFDARRAAGFNDDELNALVAQDADPNG >Mature_272_residues MRCARSAALAALGESDPARKVALVAELHAALADGRAAVFPERELSAPARGVPGRPARPELVEPRRLERRSMRSPQGRAVL LHALAHIEFNAINLALDAVWRFARMPTAFYADWLKVAAEEAHHFSLLAARLAEFGHAYGDFPAHDGLWEMCERTAGDVLA RMALVPRTLEARGLDASPPIRARLQQAGDHASAAILDVILRDEIGHVWIGNRWFRHLCDAAGLDPHPTYERLAGQYRAPR LRGPFNFDARRAAGFNDDELNALVAQDADPNG
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 29887; Mature: 29887
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCARSAALAALGESDPARKVALVAELHAALADGRAAVFPERELSAPARGVPGRPARPEL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCC VEPRRLERRSMRSPQGRAVLLHALAHIEFNAINLALDAVWRFARMPTAFYADWLKVAAEE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AHHFSLLAARLAEFGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEARGLDASPPI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCH RARLQQAGDHASAAILDVILRDEIGHVWIGNRWFRHLCDAAGLDPHPTYERLAGQYRAPR HHHHHHCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC LRGPFNFDARRAAGFNDDELNALVAQDADPNG CCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MRCARSAALAALGESDPARKVALVAELHAALADGRAAVFPERELSAPARGVPGRPARPEL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCCCCCCC VEPRRLERRSMRSPQGRAVLLHALAHIEFNAINLALDAVWRFARMPTAFYADWLKVAAEE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AHHFSLLAARLAEFGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEARGLDASPPI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCH RARLQQAGDHASAAILDVILRDEIGHVWIGNRWFRHLCDAAGLDPHPTYERLAGQYRAPR HHHHHHCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC LRGPFNFDARRAAGFNDDELNALVAQDADPNG CCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]