| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812990
Identifier: 237812990
GI number: 237812990
Start: 2678476
End: 2679366
Strand: Reverse
Name: 237812990
Synonym: GBP346_A2750
Alternate gene names: NA
Gene position: 2679366-2678476 (Counterclockwise)
Preceding gene: 237812991
Following gene: 237812989
Centisome position: 65.37
GC content: 70.82
Gene sequence:
>891_bases ATGCACTCCACCCAATCTGTCTCCGATTTCGTCACGGTTCGCGGCGTGAAGCTGCATGTGCGCCGCTGGGGGCGGCCCGA TGCGCCGACGCTCTACATGCTGCACGGCTGGATGGACGTCGCCGCGTCGTTCCAGTTCGTCGTCGACGCGCTCGCGGGCG ACTGGCAGGTGATCGCGCCCGACGCACGCGGCTTCGGCCTGTCCGACTGGCCGGTCGCCGCGCAAGGCGGCGGCCATTAC TGGTTCCACGAATACCTGGCGGACCTCGAGGCGCTGATCGACCACTACACGCCCGATGGCGAAGTGAATCTCGTCGGCCA CAGCATGGGCGCGAACGTCGTGTGCCTCTATGCGGGCGCGCGGCCGCAGCGGGTGCGGCGCGTCGTCGATCTGGAGGGCT TCGGGCTCGCGCCGGCGCGCGCCGAGCAGGCGCCGCGGCGTCTCGCGCAGTGGCTCGACGAGCTGCGCGCGCCGCCGGAG CTCAAGCGCTACGCGTCGCTCGAAGACGTCGCCGCGCGCCTCGTGAAGACGAATCCGCGCCTCGAGCCGCGCCGCGCGGC GTTTCTCGCCGCGCATTGGTCGACCCGCGACGCGGACGGCCGGTACCGGCTGCTCGCGGATCCCGCGCACAAGCTGCGCG GCCCGCTGCTGTACCGGCTCGACGAGGTGATGGCGATCTGGTCGAAGGTGCGCGCGAAGGTGCTGCACGTCGAGGCCGTC GATTCGCCGACGCTCGCGTTCCTGGCGGGCGAGATTCCGATCGCCGAGTTCAAGGCGCGCTTCGCCGCGTTCGCCGACTG GCGCGAGAAGCGCGTCGAAGACGCGGGGCACATGGTTCATCACGACCAGCCGGAGCAGATCGCGGCGCTGATCGAGGCGT TCTGCGCCTGA
Upstream 100 bases:
>100_bases CTAGAGAAGTGCCTCGACACGCGTGCGGCATCGCGGCTCGCTCCGCGCCGGATGGGCTGGATCGATATAATCGAACGGTC ATTCTTTTTTGGCGGCTGCG
Downstream 100 bases:
>100_bases GCCGGCGATGTCGGTCGCGCCGATCCGGGGCGCGGCGAGGCGGCGAGGCGGCGAGGCGACGAGGCGGCGAGGCGGCGAAA GGGCGGGCGCGGACGGCGCA
Product: alpha/beta hydrolase family protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Protein; Hydrolase/Acyltransferase; Beta-Ketoacyl Synthase; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acytransferase; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Lipase LipA; Hydrolase Or Acetyltransferase; Polyketide Synthase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MHSTQSVSDFVTVRGVKLHVRRWGRPDAPTLYMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAAQGGGHY WFHEYLADLEALIDHYTPDGEVNLVGHSMGANVVCLYAGARPQRVRRVVDLEGFGLAPARAEQAPRRLAQWLDELRAPPE LKRYASLEDVAARLVKTNPRLEPRRAAFLAAHWSTRDADGRYRLLADPAHKLRGPLLYRLDEVMAIWSKVRAKVLHVEAV DSPTLAFLAGEIPIAEFKARFAAFADWREKRVEDAGHMVHHDQPEQIAALIEAFCA
Sequences:
>Translated_296_residues MHSTQSVSDFVTVRGVKLHVRRWGRPDAPTLYMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAAQGGGHY WFHEYLADLEALIDHYTPDGEVNLVGHSMGANVVCLYAGARPQRVRRVVDLEGFGLAPARAEQAPRRLAQWLDELRAPPE LKRYASLEDVAARLVKTNPRLEPRRAAFLAAHWSTRDADGRYRLLADPAHKLRGPLLYRLDEVMAIWSKVRAKVLHVEAV DSPTLAFLAGEIPIAEFKARFAAFADWREKRVEDAGHMVHHDQPEQIAALIEAFCA >Mature_296_residues MHSTQSVSDFVTVRGVKLHVRRWGRPDAPTLYMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAAQGGGHY WFHEYLADLEALIDHYTPDGEVNLVGHSMGANVVCLYAGARPQRVRRVVDLEGFGLAPARAEQAPRRLAQWLDELRAPPE LKRYASLEDVAARLVKTNPRLEPRRAAFLAAHWSTRDADGRYRLLADPAHKLRGPLLYRLDEVMAIWSKVRAKVLHVEAV DSPTLAFLAGEIPIAEFKARFAAFADWREKRVEDAGHMVHHDQPEQIAALIEAFCA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33168; Mature: 33168
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSTQSVSDFVTVRGVKLHVRRWGRPDAPTLYMLHGWMDVAASFQFVVDALAGDWQVIAP CCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC DARGFGLSDWPVAAQGGGHYWFHEYLADLEALIDHYTPDGEVNLVGHSMGANVVCLYAGA CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC RPQRVRRVVDLEGFGLAPARAEQAPRRLAQWLDELRAPPELKRYASLEDVAARLVKTNPR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCC LEPRRAAFLAAHWSTRDADGRYRLLADPAHKLRGPLLYRLDEVMAIWSKVRAKVLHVEAV CCHHHHHEEEEECCCCCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEC DSPTLAFLAGEIPIAEFKARFAAFADWREKRVEDAGHMVHHDQPEQIAALIEAFCA CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MHSTQSVSDFVTVRGVKLHVRRWGRPDAPTLYMLHGWMDVAASFQFVVDALAGDWQVIAP CCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC DARGFGLSDWPVAAQGGGHYWFHEYLADLEALIDHYTPDGEVNLVGHSMGANVVCLYAGA CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC RPQRVRRVVDLEGFGLAPARAEQAPRRLAQWLDELRAPPELKRYASLEDVAARLVKTNPR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCC LEPRRAAFLAAHWSTRDADGRYRLLADPAHKLRGPLLYRLDEVMAIWSKVRAKVLHVEAV CCHHHHHEEEEECCCCCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEC DSPTLAFLAGEIPIAEFKARFAAFADWREKRVEDAGHMVHHDQPEQIAALIEAFCA CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA