Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812957

Identifier: 237812957

GI number: 237812957

Start: 2646911

End: 2648404

Strand: Reverse

Name: 237812957

Synonym: GBP346_A2717

Alternate gene names: NA

Gene position: 2648404-2646911 (Counterclockwise)

Preceding gene: 237812958

Following gene: 237812956

Centisome position: 64.62

GC content: 67.6

Gene sequence:

>1494_bases
ATGAGCCGGGCGTATCCGATGCTCGCGCGACGCGGGTTCGTGGTACCGACGCGGCTGAAGGCGGCGGCGTACGAATCGGC
GAGCACGGGCGGCGCTCGCGCACGGTCGTGGAAGGCGTCGAGTGCCGGACCGAACGCGGCGGCCGCGCAAAACCTGCCGC
TGATGCGGCATCGGGCGCGCGACGCGATCCGAAACGACCCGTGGGCGAAAGCCGCGATCACGCGGCTCGTGTCGAACACG
ATCGGTTCCGGCATACAGGCGCATCCGCGACATCCCGACGAGGCGATGCGAAACGCGCAAAAGCAGCTTTGGGAAGACAG
CACCGAGGAGATCGACGCGGACGGGCTGTTCGACATGGCGGGTTTGCAGACGCTCGCTGCTCGCGCGTTCTTCAGCGACG
GCGAGGTGCTCGTGCGGCGGCGTCTGCGCAGCTGGCACGATGGCTTGGCCGTGCCGTTGCAGGTGCAGTTGCTCGAAGCC
GATCATCTGCCGGTGAGCAAGAACGAACGCCTGCCGCGCGGGGAGATCGTCAACGGCGTCGAGTTCGACGACGATGGACG
GCGCATTGCCTATCACCTGCTGACGCGGCATCCCGGCGAGTACGGTCGACAGGCCGGCGACAGCACGCGGACGGTGCGCG
TGCCGGCCGACGAGATCGCGCACGTGTTCCTTGCGCTGCGGCCGGGGCAGGTGCGCGGCGTGCCCGAACTGTCGACGGTG
CTGCTGCGGCTGCATTCGCTCGACAACTTCGACGACGCGGTGCTGTTCCGGCAAGAGGTCAGCAACCTGTTCGCGGGCTT
CATCACGAAGCCGCACGCGGAGCTTGGGCCGATGGGCGATCCCGTTTCGGGCGCGCCGATGCGATACGACGACGACGGGT
TTTCGCCGGTCGTGTCGCTCGAACCCGGCGGCATGCAGGAGCTTGCGCCCGGTGAGGAGGTGAGATTTTCGGAGCCGCCG
GGCGCGGGCAACGACTATGTGCCGTTCATGCGCCAGCAACTGATGGCGTCGGCCGCGTCGGTCGGCATGCCTTACGAGGT
GCTCACGGGCGATCTGCGCGACGTGAGCGATCGCGTGCTGCGCGTGATTCTCAACGAGTTCCGGCGCAGCGTCGAACAGA
TTCAGTGGAATGTGTTCATTCACCAGTTCTGCCGCAAGGTGTGGCGCTGGTGGGTCGACGCATGCGCGCTGTCGGGCGCG
CTGCCGATGCCGAACTACTTCCGCCGGCGTCGCGACTATCTGCGCGTGCGATGGGTGCCGCAGGGCTGGCCGTATATCCA
TCCGGTGCAGGACGTCACCGCGAAGCGCATGGAGATCCGCGCGGGCCTCGCGAGCCGCACGGGCGCGGTGCTCGCGCGCG
GCGACGATCCGGAGCAGGTCGACGCGGAGAACGCGGCGGATCTCGCGCGCGAGCAGCGGCTCGGCCTGCGATACGACACG
CAGCTCGCGATTGAAGACGGAAACGGCAGTGTTTTGAAAGAGGACGGTGAATGA

Upstream 100 bases:

>100_bases
TGGAGCTTCGCGAGGCGCAAACCGAGATCATTCGTGCGCTCGACGGCGCGAGCGGGCGCTCGCGCATCGTTCGGCTGCGG
CACGCCGGCAAGGGGGTTCG

Downstream 100 bases:

>100_bases
AACGAAACCGCAAGTGGTGGGACATCCGCGCGCAGGCGCAGGCGGGCGGCGGCAAGGTCGCCGAGATCCGGATCTATAGC
GACATCGGATTCTGGGGCAC

Product: phage portal protein, lambda family

Products: NA

Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Portal Protein; Bacteriophage Capsid Protein; Portal Protein Lambda Family; Phage-Related Portal Protein; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Prophage; Head-Tail Preconnector Protein Phage Origin; Portal Protein GPB Of Phage Lambda; Phage Protein Gp; Phage Portal Protein Lambda Family Protein

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRARDAIRNDPWAKAAITRLVSNT
IGSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMAGLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEA
DHLPVSKNERLPRGEIVNGVEFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTV
LLRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSLEPGGMQELAPGEEVRFSEPP
GAGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVLRVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGA
LPMPNYFRRRRDYLRVRWVPQGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDT
QLAIEDGNGSVLKEDGE

Sequences:

>Translated_497_residues
MSRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRARDAIRNDPWAKAAITRLVSNT
IGSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMAGLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEA
DHLPVSKNERLPRGEIVNGVEFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTV
LLRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSLEPGGMQELAPGEEVRFSEPP
GAGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVLRVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGA
LPMPNYFRRRRDYLRVRWVPQGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDT
QLAIEDGNGSVLKEDGE
>Mature_496_residues
SRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRARDAIRNDPWAKAAITRLVSNTI
GSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMAGLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEAD
HLPVSKNERLPRGEIVNGVEFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTVL
LRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSLEPGGMQELAPGEEVRFSEPPG
AGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVLRVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGAL
PMPNYFRRRRDYLRVRWVPQGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDTQ
LAIEDGNGSVLKEDGE

Specific function: Unknown

COG id: COG5511

COG function: function code R; Bacteriophage capsid protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55438; Mature: 55307

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRAR
CCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
DAIRNDPWAKAAITRLVSNTIGSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMA
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHH
GLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEADHLPVSKNERLPRGEIVNGV
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
EFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTV
CCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHH
LLRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEE
EPGGMQELAPGEEVRFSEPPGAGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVL
CCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
RVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGALPMPNYFRRRRDYLRVRWVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEEEEC
QGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHHHHHHHHCCCEECC
QLAIEDGNGSVLKEDGE
EEEEECCCCCEECCCCC
>Mature Secondary Structure 
SRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRAR
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
DAIRNDPWAKAAITRLVSNTIGSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMA
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHH
GLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEADHLPVSKNERLPRGEIVNGV
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
EFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTV
CCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHH
LLRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEE
EPGGMQELAPGEEVRFSEPPGAGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVL
CCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
RVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGALPMPNYFRRRRDYLRVRWVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEEEEEC
QGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHHHHHHHHCCCEECC
QLAIEDGNGSVLKEDGE
EEEEECCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA