| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812956
Identifier: 237812956
GI number: 237812956
Start: 2645814
End: 2646914
Strand: Reverse
Name: 237812956
Synonym: GBP346_A2716
Alternate gene names: NA
Gene position: 2646914-2645814 (Counterclockwise)
Preceding gene: 237812957
Following gene: 237812955
Centisome position: 64.58
GC content: 68.12
Gene sequence:
>1101_bases ATGAAACGAAACCGCAAGTGGTGGGACATCCGCGCGCAGGCGCAGGCGGGCGGCGGCAAGGTCGCCGAGATCCGGATCTA TAGCGACATCGGATTCTGGGGCACCGACGCGCAGAACTTCGTGTCGCAGCTCGATGCCGTCGCAGCCGACGCATCGTCGA TCACGGTCGCGATCAATTCGATGGGCGGCGACGTGTTCGACGCGTTCGCAATCTACAACGCGTTGCGCCGCTACGCCGGC AAGGTGAAGGGGCGCGTCGACGGCATCGCGGCGTCGGCCGCATCGCTGGTGCTGATGGCGTGCGACGAGATCGAGATGCC CGAGAACGCGCTGCTGATGATCCACCATCCGCATACGGTCGCGGCCGGCGAATCGAAGGATCTGCGCCGCGTCGCCGAGC TGCTCGACAACGCGAGCGCCGGCATTCTGGCGGCGTACGCACGGCGCAGCGGCCTGTCCGAAGACGACGTGCGGGCCATG ATGGACGCGGAGACGTGGCTGACGGCCGCGCAGGCCAAGGAGAAGGGTTTCTGCGACGTGATCGAGGCTCCGGTCAAGCT CGCGGCGTCCGCGGGCACTGCGCCGCTTCTCGCACGTTTCTCGGCCGTGCCCGAGCAGGTTGTGGCGCTGCTCGACGCGG TTGACGAACCGGACGCGGATTCGACCGTTCCGCCGGAGAACACGCCGACCGATCCGACGCCGGATCCCGAGCCGGAGCCG CCATCTCAGACGCCCGATGTCACGGCACTCGCCGCGCACGTGTTCAATTCGCTGCGGGAAGCCAATCTCGCGGCATGCGC CGAAGGCGTGATCGCGGTGACCGGTCTGCGTGATCGCGAGACGGTCGATCGCGCGATCCGCAACGCAACCGATATCGCGG GGATCTGCCTCGCGGCGAGCCAGACGGATCTGACCGCGCAATACGTCGCGGACGGTCTGACGCCCGATCAGGTGCGCGCG CGGCTGTTCGAGCGCCTCACGGCATCGAGCGCCCGCATCAACAGCCGGCCCGATCCGGCGCAGCAGCAGACGCAACCGCA GGCACGCGGCCGCACGTTGCGCACGTCCGACATCTACGCGGCTCGCCGCGTGGCCAAGTAA
Upstream 100 bases:
>100_bases ACGCGGCGGATCTCGCGCGCGAGCAGCGGCTCGGCCTGCGATACGACACGCAGCTCGCGATTGAAGACGGAAACGGCAGT GTTTTGAAAGAGGACGGTGA
Downstream 100 bases:
>100_bases CTTTTCATCGCCGAAAGGAGCGCTGAATGTCCAACATCCAAACCATGGGCGCGTTGCCCGCCGAATTCCTGATCTCGGAG GGGCCGGGCCAGATCTCGCG
Product: peptidase S14, ClpP
Products: NA
Alternate protein names: ATP-Dependent Clp Protease Proteolytic Subunit; Clp Protease; ClpP Protease; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; Serine Protease; Protease Subunit Of ATP-Dependent Clp Protease; Clp Protease Domain Protein; ClpP Protease Family Protein; ATP-Dependent Endopeptidase Clp Proteolytic Subunit ClpP; Phage Protein; ATP Dependent Clp Protease; ATP-Dependent Protease; Phage-Related Clp Protease; Prophage; ATP-Dependent Clp Protease; Phage Clp-Protease; Protease/Scaffold Protein; Endopeptidase Clp; Protease Subunit Of ATP-Dependent Clp Proteases; Peptidase S; Prophage Clp Protease-Like Protein; Phage ATP-Dependent Endopeptidase ClpP; Clp Protease Domain-Containing Protein; Clp Protease Family Protein; Clp-Like Protease; Clp Protease Protein; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Phage Portal Protein Lambda Family; Protease; ClpP Family Serine Protease; Phage Protease; ClpP-Type Protease; Phage Related Protease
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK
Sequences:
>Translated_366_residues MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK >Mature_366_residues MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK
Specific function: Unknown
COG id: COG0740
COG function: function code OU; Protease subunit of ATP-dependent Clp proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39034; Mature: 39034
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC MGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE AAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH IEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAAS CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC QTDLTAQYVADGLTPDQVRARLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYA CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCEEHHHHHH ARRVAK HHHHCC >Mature Secondary Structure MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC MGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE AAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH IEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAAS CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC QTDLTAQYVADGLTPDQVRARLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYA CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCEEHHHHHH ARRVAK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA