Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812956

Identifier: 237812956

GI number: 237812956

Start: 2645814

End: 2646914

Strand: Reverse

Name: 237812956

Synonym: GBP346_A2716

Alternate gene names: NA

Gene position: 2646914-2645814 (Counterclockwise)

Preceding gene: 237812957

Following gene: 237812955

Centisome position: 64.58

GC content: 68.12

Gene sequence:

>1101_bases
ATGAAACGAAACCGCAAGTGGTGGGACATCCGCGCGCAGGCGCAGGCGGGCGGCGGCAAGGTCGCCGAGATCCGGATCTA
TAGCGACATCGGATTCTGGGGCACCGACGCGCAGAACTTCGTGTCGCAGCTCGATGCCGTCGCAGCCGACGCATCGTCGA
TCACGGTCGCGATCAATTCGATGGGCGGCGACGTGTTCGACGCGTTCGCAATCTACAACGCGTTGCGCCGCTACGCCGGC
AAGGTGAAGGGGCGCGTCGACGGCATCGCGGCGTCGGCCGCATCGCTGGTGCTGATGGCGTGCGACGAGATCGAGATGCC
CGAGAACGCGCTGCTGATGATCCACCATCCGCATACGGTCGCGGCCGGCGAATCGAAGGATCTGCGCCGCGTCGCCGAGC
TGCTCGACAACGCGAGCGCCGGCATTCTGGCGGCGTACGCACGGCGCAGCGGCCTGTCCGAAGACGACGTGCGGGCCATG
ATGGACGCGGAGACGTGGCTGACGGCCGCGCAGGCCAAGGAGAAGGGTTTCTGCGACGTGATCGAGGCTCCGGTCAAGCT
CGCGGCGTCCGCGGGCACTGCGCCGCTTCTCGCACGTTTCTCGGCCGTGCCCGAGCAGGTTGTGGCGCTGCTCGACGCGG
TTGACGAACCGGACGCGGATTCGACCGTTCCGCCGGAGAACACGCCGACCGATCCGACGCCGGATCCCGAGCCGGAGCCG
CCATCTCAGACGCCCGATGTCACGGCACTCGCCGCGCACGTGTTCAATTCGCTGCGGGAAGCCAATCTCGCGGCATGCGC
CGAAGGCGTGATCGCGGTGACCGGTCTGCGTGATCGCGAGACGGTCGATCGCGCGATCCGCAACGCAACCGATATCGCGG
GGATCTGCCTCGCGGCGAGCCAGACGGATCTGACCGCGCAATACGTCGCGGACGGTCTGACGCCCGATCAGGTGCGCGCG
CGGCTGTTCGAGCGCCTCACGGCATCGAGCGCCCGCATCAACAGCCGGCCCGATCCGGCGCAGCAGCAGACGCAACCGCA
GGCACGCGGCCGCACGTTGCGCACGTCCGACATCTACGCGGCTCGCCGCGTGGCCAAGTAA

Upstream 100 bases:

>100_bases
ACGCGGCGGATCTCGCGCGCGAGCAGCGGCTCGGCCTGCGATACGACACGCAGCTCGCGATTGAAGACGGAAACGGCAGT
GTTTTGAAAGAGGACGGTGA

Downstream 100 bases:

>100_bases
CTTTTCATCGCCGAAAGGAGCGCTGAATGTCCAACATCCAAACCATGGGCGCGTTGCCCGCCGAATTCCTGATCTCGGAG
GGGCCGGGCCAGATCTCGCG

Product: peptidase S14, ClpP

Products: NA

Alternate protein names: ATP-Dependent Clp Protease Proteolytic Subunit; Clp Protease; ClpP Protease; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; Serine Protease; Protease Subunit Of ATP-Dependent Clp Protease; Clp Protease Domain Protein; ClpP Protease Family Protein; ATP-Dependent Endopeptidase Clp Proteolytic Subunit ClpP; Phage Protein; ATP Dependent Clp Protease; ATP-Dependent Protease; Phage-Related Clp Protease; Prophage; ATP-Dependent Clp Protease; Phage Clp-Protease; Protease/Scaffold Protein; Endopeptidase Clp; Protease Subunit Of ATP-Dependent Clp Proteases; Peptidase S; Prophage Clp Protease-Like Protein; Phage ATP-Dependent Endopeptidase ClpP; Clp Protease Domain-Containing Protein; Clp Protease Family Protein; Clp-Like Protease; Clp Protease Protein; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Phage Portal Protein Lambda Family; Protease; ClpP Family Serine Protease; Phage Protease; ClpP-Type Protease; Phage Related Protease

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG
KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM
MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP
PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA
RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK

Sequences:

>Translated_366_residues
MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG
KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM
MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP
PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA
RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK
>Mature_366_residues
MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAG
KVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAM
MDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP
PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAASQTDLTAQYVADGLTPDQVRA
RLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK

Specific function: Unknown

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39034; Mature: 39034

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINS
CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
MGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
AAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDV
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
IEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC
QTDLTAQYVADGLTPDQVRARLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCEEHHHHHH
ARRVAK
HHHHCC
>Mature Secondary Structure
MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINS
CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
MGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
AAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDV
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
IEAPVKLAASAGTAPLLARFSAVPEQVVALLDAVDEPDADSTVPPENTPTDPTPDPEPEP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSQTPDVTALAAHVFNSLREANLAACAEGVIAVTGLRDRETVDRAIRNATDIAGICLAAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC
QTDLTAQYVADGLTPDQVRARLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCEEHHHHHH
ARRVAK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA