| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812954
Identifier: 237812954
GI number: 237812954
Start: 2644383
End: 2645477
Strand: Reverse
Name: 237812954
Synonym: GBP346_A2714
Alternate gene names: NA
Gene position: 2645477-2644383 (Counterclockwise)
Preceding gene: 237812955
Following gene: 237812953
Centisome position: 64.55
GC content: 65.11
Gene sequence:
>1095_bases ATGACCTGGCCGCGCATCACATCGTCATCCGCTGATCGCAGCGAATTCCCTGATTCCGAAGCCGCGCCGATGCGCGGCTT TTTCATTTCCGGAGTGCATATGGCAGACATCGCTATCTTCAACGACGACGCATTCTCGCTGTCGTCCATGACCGCGGCAA TCAACGAGCAGCCGCACGTGCCGGGCCGGCTCGGCGAGGCGGGCCTGTTCGACGAGGAAGGCATCACGACGACGACGGTG CAGATCGAGCGCGACGGCGACACGCTCGCGCTCGTGCAGTCCGGCGTGCGCGGTCAGCCCGCGCCGAACGTGCTGGGCAG CAAGCCGAGCCTGATTCCGTTCAACACGGTCCATCTGCCGCAGCGCGCGGTCATCAAGGCGGACGAGATCCAGAATCTGC GCGCGTTCGGCGACGATTCGGAACTGGAGACGGTCCAGCGCTACGTCGACAAGCGGCTCGCGAAGATGCGCCGCCAGCTC GAAGCGACGCACGAGTACCACCGCCTCGGCGCGGTGCGCGGCGTGATCCTCGACGCGGACGGCAAGCATGTCGTCGCGAA CCTGCTCGACCGCTTCGGCATCGAGCAGCAGGTGATCGAATACGAACTGTCGAACGCGAAGACCGAGATCCGGATCAAGA ACGAGGACACGCTCGAAGCGATCGAGGACGCGCTCGGCAACGTGCCGTTTTCGAGCGTGCGTGCGTTCTGCGGGCGTAAC TTTTGGCGCAAGCTGCTGACGCTGCCGACCGTGAAAGAGACGTTCCTCAACACGGCGGCAGCGGCGGCGCTGCGCGGCGA TCCGCGCGGCGCGATCGAGCTCGACGGCATCGTGTTCGAGCGTTACCGCGGCAAGATCGGCGGCATCCCGTTCGTCGGCG ACGACGAGGCGTATGCGGTGCCGGAGGGCGTGCCGGATCTGTTCATCTCGCGTTTCGCGCCCGGCGATTACGTCGACGCG GTGAACACGATCGGGCTGCCGTACTACGCACGGCAGGAAATCATGCCGTTCAACAAGGGCGTCGAGATCGAGGCGCAGTC GAACCCGATCCATCTGTGTACGCGCCCGCGCGCGTGCATTCGTCTGAAGGCGTGA
Upstream 100 bases:
>100_bases CCGTTGCCGGCGTCCGACAAGCCGCGCCCGGCGGTTGCGATCAAGCGGCTCGCCGAAGTCGACGCACGCCTGCTCGCGGG GCTCGACGCGCCCGCGCGCG
Downstream 100 bases:
>100_bases CGCATGGCGTTTCACGATCTGATGACGGACGTCGACGCGGCCGTGCTGCGGGATCTGGGCGACGACGATGTCTTCGTCGA CGGCCGGCCCGTGCGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTWPRITSSSADRSEFPDSEAAPMRGFFISGVHMADIAIFNDDAFSLSSMTAAINEQPHVPGRLGEAGLFDEEGITTTTV QIERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLPQRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQL EATHEYHRLGAVRGVILDADGKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRN FWRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAVPEGVPDLFISRFAPGDYVDA VNTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACIRLKA
Sequences:
>Translated_364_residues MTWPRITSSSADRSEFPDSEAAPMRGFFISGVHMADIAIFNDDAFSLSSMTAAINEQPHVPGRLGEAGLFDEEGITTTTV QIERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLPQRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQL EATHEYHRLGAVRGVILDADGKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRN FWRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAVPEGVPDLFISRFAPGDYVDA VNTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACIRLKA >Mature_363_residues TWPRITSSSADRSEFPDSEAAPMRGFFISGVHMADIAIFNDDAFSLSSMTAAINEQPHVPGRLGEAGLFDEEGITTTTVQ IERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLPQRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQLE ATHEYHRLGAVRGVILDADGKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRNF WRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAVPEGVPDLFISRFAPGDYVDAV NTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACIRLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40154; Mature: 40023
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWPRITSSSADRSEFPDSEAAPMRGFFISGVHMADIAIFNDDAFSLSSMTAAINEQPHV CCCCCCCCCCCCHHHCCCCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHHHCCCCCC PGRLGEAGLFDEEGITTTTVQIERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLP CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCC QRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQLEATHEYHRLGAVRGVILDAD HHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC GKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRN CHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHH FWRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAV HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCEEC PEGVPDLFISRFAPGDYVDAVNTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACI CCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCEE RLKA EECC >Mature Secondary Structure TWPRITSSSADRSEFPDSEAAPMRGFFISGVHMADIAIFNDDAFSLSSMTAAINEQPHV CCCCCCCCCCCHHHCCCCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHHHCCCCCC PGRLGEAGLFDEEGITTTTVQIERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLP CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCC QRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQLEATHEYHRLGAVRGVILDAD HHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC GKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRN CHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHH FWRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAV HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCEEC PEGVPDLFISRFAPGDYVDAVNTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACI CCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCEE RLKA EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA