| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812946
Identifier: 237812946
GI number: 237812946
Start: 2640281
End: 2640856
Strand: Reverse
Name: 237812946
Synonym: GBP346_A2706
Alternate gene names: NA
Gene position: 2640856-2640281 (Counterclockwise)
Preceding gene: 237812947
Following gene: 237812945
Centisome position: 64.43
GC content: 65.8
Gene sequence:
>576_bases ATGAGTGAACGTCTATTGCCGTCGAATCAGACGCCGCTCGAAGCCGCGCTCGCTCGCGTGCTGCGGCCGAGCGTCGATCC GGAGATCCTGCGCACGCTGATGGACGTCGATCGATGTCCGGCCGCATTCCTGCCGTGGCTCGCATGGTCGGTCGCCGTCG ACGGGTGGGAGTTGGCCGAGTCGGACGACGCGCGGCGTGCGCTGATCAAAGGCTCGTTGGCGTTGCATCGCAGGAAGGGC ACGCCGTGGGTCGTCCGCGAAATCGTTCGGCGGCTCGGCTTCGGCGAAATCGAGATTCAGGAAGGACGGATCGCGAAGCG TCGCGACGGCACAGCGCGGCGGGACGGCAACTACGTTCATGGCCGCGCAAGCGCGTGGGCCGAGTACATCGTGACGCTGA AGCAGCCGATCACGCGCGGTCAAGGGCAGGCGCTGATGCGCGCGATCGAGCGCTACGCGCCCGCGCGCAGTCAACTGGTC AAGCTCGACTATTCGGCGATTGCGATCCGCCATAACGGCACGGCCGTCCGCAACGGCCAATATTCTCGGGGAGTGGTAGC AGCATGGCAAACCTGA
Upstream 100 bases:
>100_bases GTCGCGCGCGTCGATCTGAAAGCTCCGCTGGGCGACGTCACGTGCAACGGGCAGGAGTTCGCCGATTGCACGTCCGTCGT CCTGAATCTGAAGGTGCTCG
Downstream 100 bases:
>100_bases AAGAACAAGCCCAATGGGAAGACGGGGTATATCAATTGGAGACGTCGGATCCGGTGATAGGTGGCCCGGATGGGATCGAC AACCTGCAAGCGAAGCAACT
Product: phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Bacteriophage Tail Fiber Protein; Phage Tail Protein; Phage-Related Tail Protein; Polyprotein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Bacteriophage Tail Protein I; Bacteriophage Tail Protein; Phage Tail Protein GpI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein GpI; Pyocin R2_PP Tail Formation Protein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAESDDARRALIKGSLALHRRKG TPWVVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVHGRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLV KLDYSAIAIRHNGTAVRNGQYSRGVVAAWQT
Sequences:
>Translated_191_residues MSERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAESDDARRALIKGSLALHRRKG TPWVVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVHGRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLV KLDYSAIAIRHNGTAVRNGQYSRGVVAAWQT >Mature_190_residues SERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAESDDARRALIKGSLALHRRKGT PWVVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVHGRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLVK LDYSAIAIRHNGTAVRNGQYSRGVVAAWQT
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21436; Mature: 21305
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAE CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCC SDDARRALIKGSLALHRRKGTPWVVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVH CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEC GRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLVKLDYSAIAIRHNGTAVRNGQ CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEECCEEEEEEECCCEEECCC YSRGVVAAWQT CCCCEEEEECC >Mature Secondary Structure SERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAE CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCC SDDARRALIKGSLALHRRKGTPWVVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVH CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEC GRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLVKLDYSAIAIRHNGTAVRNGQ CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEECCEEEEEEECCCEEECCC YSRGVVAAWQT CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA