| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is fabI [H]
Identifier: 237812858
GI number: 237812858
Start: 2551765
End: 2552556
Strand: Direct
Name: fabI [H]
Synonym: GBP346_A2617
Alternate gene names: 237812858
Gene position: 2551765-2552556 (Clockwise)
Preceding gene: 237812851
Following gene: 237812860
Centisome position: 62.26
GC content: 66.04
Gene sequence:
>792_bases ATGGGCTTTCTCGACGGTAAACGTATTCTGCTGACGGGCCTCTTGTCGAACCGTTCGATCGCTTACGGCATCGCCAAGGC GTGCAAGCGCGAAGGCGCCGAGCTGGCGTTCACCTACGTCGGCGATCGCTTCAAGGATCGCATCACCGAGTTCGCGGCCG AGTTCGGCAGCGAACTCGTGTTCCCGTGCGATGTCGCCGACGATGCGCAGATCGATGCGCTCTTCGCGTCGCTGAAGACG CACTGGGATTCGCTCGACGGCCTCGTCCACTCGATCGGCTTCGCGCCGCGCGAGGCGATCGCGGGCGACTTCCTCGACGG CCTCACGCGCGAGAACTTCCGCATCGCGCACGACATCTCCGCATACAGCTTCCCCGCGCTCGCGAAGGCGGCGCTGCCGA TGCTGTCGGACGATGCGTCGCTGCTCACGCTGTCGTATCTCGGCGCGGAGCGGGCGATCCCGAACTACAACACGATGGGC CTCGCGAAGGCGGCGCTCGAGGCGAGCGTGCGCTATCTCGCGGTGTCGCTCGGCGCGAAGGGCGTGCGCGTGAACGCGAT CTCGGCGGGCCCGATCAAGACGCTCGCGGCAAGCGGCATCAAGAGCTTCGGCAAGATCCTCGATTTCGTCGAGAGCAACT CGCCGCTCAAGCGCAACGTGACGATCGAGCAGGTCGGCAACGCGGGCGCGTTCCTGCTGTCGGACCTCGCGAGCGGCGTC ACGGCCGAAGTCATGCACGTCGACTCGGGCTTCAACGCGGTGGTGGGCGGGATGGCCGGCCTCGAGGAATAA
Upstream 100 bases:
>100_bases GAGGATGGCGATGTGAGAGAATTCTACCCATTCGCAACCGGTTGCAGCCAAACGCAGCCCGCCGACCGTGCGGGCGCGGG CGCCACACATAGGAGAATTC
Downstream 100 bases:
>100_bases GGCCGCCGGGCGCCGGCCCGGGCCCCGCGCCTTGACGCGGCTTCGCCCGGCGCCCCAAAAAAGCATCCCGCGCTCGCGAA AGCGCGGGATTCGTCGGAGG
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMG LAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGV TAEVMHVDSGFNAVVGGMAGLEE
Sequences:
>Translated_263_residues MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMG LAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGV TAEVMHVDSGFNAVVGGMAGLEE >Mature_262_residues GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGL AKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVT AEVMHVDSGFNAVVGGMAGLEE
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=63.8888888888889, Blast_Score=335, Evalue=2e-93, Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=30.9803921568627, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=28.90625, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=26.4, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=24.8, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 27771; Mature: 27640
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELV CCCCCCCCEEEEHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCEE FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDIS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCC AYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGV CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHCCC TAEVMHVDSGFNAVVGGMAGLEE EEEEEEECCCCHHHHHHHCCCCC >Mature Secondary Structure GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELV CCCCCCCEEEEHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCEE FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDIS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCC AYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGV CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHCCC TAEVMHVDSGFNAVVGGMAGLEE EEEEEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]