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The map label for this gene is ylbK [H]

Identifier: 237812851

GI number: 237812851

Start: 2543669

End: 2544712

Strand: Direct

Name: ylbK [H]

Synonym: GBP346_A2610

Alternate gene names: 237812851

Gene position: 2543669-2544712 (Clockwise)

Preceding gene: 237812848

Following gene: 237812858

Centisome position: 62.06

GC content: 71.36

Gene sequence:

>1044_bases
ATGCCGGCGCCGCGCGCGGCCGCCCGACGTCGTCGCGGCCGCCGAAATTTCGCCGCGTACGGCGCGCCCGTCGAGGCCGC
GCGCGGCATGCCGCCGGAGATCGAGTCGATGTCGTCCCCCCGTTTGTCCCGCCGCGCGTTCACGCTCGCCTGCGCGTCGG
CCGCCCTCGCCGCCTGCACGTCCACCGGCACGAAGCCGACGACGGGCGCCGCCACGCCCACCAACCCGACGCAGCCGCGC
GAGAAGCCGATCAGGGTCGGCGTCGCGCTCGGCGGCGGCGCGGCGCGCGGCTTCGCGCACGTCGGCGTGCTCAAGGCGCT
CGAGGCACGCGGCATTCCGGTCGAGCTCGTCGCCGGCACGAGCGCGGGCTCGGTCGTCGGCGCGCTGTACGCGTCGGGCA
TGAATGCGCTGCAGATCAACAAGCTCGCGCTCACGATGGACGAAGCGTCGATCAGCGACTGGGCGACGCCGTTCCGCTCG
CGCGGCCTGCTGCAAGGCATCGCGCTGCAGAACTTCATCAACAAGACGCTGAACAACCGGCCGATCGAGAAGATGGCCAA
GCCGCTCGGCATCGTCGCGACCGATCTGAAGAGCGGCCAGCCGATCCTGTTCCAGCGCGGCAACACGGGGCTCGCGGTGC
GTGCGTCGTGCAGCGTGCCTTCGGTGTTCGAGCCGGTGCGCATCGGCGATCGCGAATACGTCGACGGTGGGCTCGTGAGC
CCCGTGCCCGCGTCGTTCGCGCGCAAGATGGGCGCGGACTTCGTGATCGCCGTCGACATCTCGTCGCGCCCGGACGGCGC
GGCCACCGGCAATCCGATCGAGATGCTGCTGCAGACGTTCACGATCATGGGCCAGACGATCAAGACCTACGAGCTCGACA
AGTATGCCGACGTCGTGATCCGCCCGAACCTCGCCGCGATGGGCGGCAGCGACTTCAATCAGCGCAACGCGGCGATCCTC
GCGGGCGAGGAGGCGGTCGCGCGGATCATGCCGGAGCTGCAGCGCAAGCTCGCGGCCGCGCGCTCGGCGACCGCGGCCGC
CTGA

Upstream 100 bases:

>100_bases
CCACGCCGCCCCTCATCCGTTCGGCCAACGATCGCGCACCGCCGGCGCGCTTTCGTGCGCAGGCGCCCAGTTGCTTTATG
ATGTGCGCGCCGCGGCCGCC

Downstream 100 bases:

>100_bases
AGCCGACTCACGTCGCGCCGCCGCCCGCCGCGCGCCTCGGCACGCGCGCCCGGTCACGGTCATATCGCGCCGCGCCGAAA
ACGCCGCCCCAAAGCAAAAG

Product: phospholipase, patatin family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPAPRAAARRRRGRRNFAAYGAPVEAARGMPPEIESMSSPRLSRRAFTLACASAALAACTSTGTKPTTGAATPTNPTQPR
EKPIRVGVALGGGAARGFAHVGVLKALEARGIPVELVAGTSAGSVVGALYASGMNALQINKLALTMDEASISDWATPFRS
RGLLQGIALQNFINKTLNNRPIEKMAKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIGDREYVDGGLVS
PVPASFARKMGADFVIAVDISSRPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAIL
AGEEAVARIMPELQRKLAAARSATAAA

Sequences:

>Translated_347_residues
MPAPRAAARRRRGRRNFAAYGAPVEAARGMPPEIESMSSPRLSRRAFTLACASAALAACTSTGTKPTTGAATPTNPTQPR
EKPIRVGVALGGGAARGFAHVGVLKALEARGIPVELVAGTSAGSVVGALYASGMNALQINKLALTMDEASISDWATPFRS
RGLLQGIALQNFINKTLNNRPIEKMAKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIGDREYVDGGLVS
PVPASFARKMGADFVIAVDISSRPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAIL
AGEEAVARIMPELQRKLAAARSATAAA
>Mature_346_residues
PAPRAAARRRRGRRNFAAYGAPVEAARGMPPEIESMSSPRLSRRAFTLACASAALAACTSTGTKPTTGAATPTNPTQPRE
KPIRVGVALGGGAARGFAHVGVLKALEARGIPVELVAGTSAGSVVGALYASGMNALQINKLALTMDEASISDWATPFRSR
GLLQGIALQNFINKTLNNRPIEKMAKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIGDREYVDGGLVSP
VPASFARKMGADFVIAVDISSRPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILA
GEEAVARIMPELQRKLAAARSATAAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=32.7586206896552, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=32.7586206896552, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=32.7586206896552, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=32.7586206896552, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=32.7586206896552, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI148727290, Length=193, Percent_Identity=35.7512953367876, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI148727335, Length=193, Percent_Identity=35.7512953367876, Blast_Score=99, Evalue=7e-21,
Organism=Escherichia coli, GI226510936, Length=305, Percent_Identity=32.1311475409836, Blast_Score=137, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71997299, Length=166, Percent_Identity=29.5180722891566, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=166, Percent_Identity=29.5180722891566, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=186, Percent_Identity=30.6451612903226, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281376913, Length=189, Percent_Identity=32.8042328042328, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571388, Length=188, Percent_Identity=31.3829787234043, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36268; Mature: 36137

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPRAAARRRRGRRNFAAYGAPVEAARGMPPEIESMSSPRLSRRAFTLACASAALAACT
CCCCHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH
STGTKPTTGAATPTNPTQPREKPIRVGVALGGGAARGFAHVGVLKALEARGIPVELVAGT
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECC
SAGSVVGALYASGMNALQINKLALTMDEASISDWATPFRSRGLLQGIALQNFINKTLNNR
CCHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
PIEKMAKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIGDREYVDGGLVS
CHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCC
PVPASFARKMGADFVIAVDISSRPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVI
CCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCHHCEEE
RPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARSATAAA
CCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAPRAAARRRRGRRNFAAYGAPVEAARGMPPEIESMSSPRLSRRAFTLACASAALAACT
CCCHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH
STGTKPTTGAATPTNPTQPREKPIRVGVALGGGAARGFAHVGVLKALEARGIPVELVAGT
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECC
SAGSVVGALYASGMNALQINKLALTMDEASISDWATPFRSRGLLQGIALQNFINKTLNNR
CCHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
PIEKMAKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIGDREYVDGGLVS
CHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCC
PVPASFARKMGADFVIAVDISSRPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVI
CCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCHHCEEE
RPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARSATAAA
CCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]