Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812818

Identifier: 237812818

GI number: 237812818

Start: 2508819

End: 2509940

Strand: Reverse

Name: 237812818

Synonym: GBP346_A2572

Alternate gene names: NA

Gene position: 2509940-2508819 (Counterclockwise)

Preceding gene: 237812825

Following gene: 237812817

Centisome position: 61.24

GC content: 73.17

Gene sequence:

>1122_bases
TTGCGCGGGCGAGGACGGGCGCGGCGGTTCGCGGCGCGCGATGCCGGCGTGAGCCGGCCCGTGCCGGCCCGGTGGGGCGC
GGCGACGGCGCTCGATTATAGCGTGACATCGGGTGGCTCGACGCGCGGCGCGCGTGCCGCGGCGCCGTCCGGGGAAGGAA
AGACGAGGTTCGGTTTGCAAGAGAATGAACGACGCAGCGCCGGCTGGCCGACGCTCGCGATTCTGGTTGGCGCATCGGTA
TGGGGCCTGATCTGGTATCCGCTGCGCCTGCTGGCGGCGCTCGGCGTGACGGGCACGGTGGCGAGCGCGGCGACGAGCAT
CGTCGCGTGCGCGTTCGTGCTGATCGTGCGGCGCAAGTCGATCGCGACCGTGCGCCGGCATTGGCTGCTGCCCGCGCTGG
GCGTTGCCGCGGGCGTGACGAACCTCGGCTTCGTGTGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTTTTC
TATCTGACGCCCGCGTGGACCGCGATCTGCGCGCACTTCATCCTGCGCGAGCGGCTGACGGCGGCGGGCGCGGCGCTCGC
CGCGCTGTCGCTCGGCGGCGCGGTGCTGATGCTGTGGTCGCCCCGGCTCGGCGTGCCGCTGCCGTCGAACCCGGCCGAAT
GGGCGGGGCTCGCGGCCGGAATGAGCTTCGCGATGAGCAACGTGCTCGTCGTCAAGGCGAGCCGCGAGCTGCCGCGGATG
AAGCCCGAGATGCGCACGGCGACGCTGTTCGCCGGCGCGGCCGCGATGGGCGTCGCCGCCGCGTTCGTCGAGGGCCTGCC
GCCGCTGCCGGCGGGCGGTGAGCTCGGTCGCGCGGCGCTGCTCGTCGTCGGGATCGGCGTGACGGTCGCGGCGAACAACA
TGCTCGTCCAGCACGGCCTCGCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTCACGGCG
CTCACCGCGTGGCTTTTTGCCAACGAAGTGCCGAGCGCGCGCGAATGGGCGGGCGGCCTGTGCATCGTCGTCGCGACCCT
GCTGTCGAGCCGCGTGCATCGCGCCCGCCCGGCCGAAGACGAACCGCGCGAGCCGCGGGACGGCGCGCGCGCGATGGTAT
GA

Upstream 100 bases:

>100_bases
GAGGATTCACGGGCGTGGGGCTCACGGAGCCGGTAGGTGGCCGATCGGACGGGCCGGTTTAAGCGAAGCGGCGCAAGGCG
GCGGCGCGGCTGGCGCCGCC

Downstream 100 bases:

>100_bases
TTGGCCCCATTCGCGGGGCCGACTGCTTGACAGCACGGCCCCGTTTTTCGAATCTTGGGCGTGCGGCGCGCGCGCGGGCC
TTCCGGCCGAATCGCGGCGC

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV
WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF
YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM
KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA
LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV

Sequences:

>Translated_373_residues
MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV
WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF
YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM
KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA
LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV
>Mature_373_residues
MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV
WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF
YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM
KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA
LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39111; Mature: 39111

Theoretical pI: Translated: 11.99; Mature: 11.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQ
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEECCCC
ENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM
HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCCCC
KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCHHHHCCHHHHHHHH
ARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAED
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC
EPREPRDGARAMV
CCCCCCCCCCCCC
>Mature Secondary Structure
MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQ
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEECCCC
ENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM
HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCCCC
KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCHHHHCCHHHHHHHH
ARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAED
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC
EPREPRDGARAMV
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA