| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is tesA [H]
Identifier: 237812669
GI number: 237812669
Start: 2374666
End: 2375346
Strand: Direct
Name: tesA [H]
Synonym: GBP346_A2419
Alternate gene names: 237812669
Gene position: 2374666-2375346 (Clockwise)
Preceding gene: 237812667
Following gene: 237812674
Centisome position: 57.94
GC content: 70.78
Gene sequence:
>681_bases TTGAGCATGAAACGCACAGTTCACTGGAAGGCCGGCGCGACGCTCGCCGTGGTCGCGACGTTCGCCGGCCCGGCATCCGC CGCCACGAATGCAGCGCCCGCGCCGAACGCCGACGGCGGCAAGCCGGTGATCGTCGTGCTCGGCGACAGCCTGTCGGCCG AATACGGCCTGCCGCGCGATACGGGCTGGGTCGCGCTGATGCGCGCGCGCCTCGCGGCCGAGCGAATCGATTATAGCGTC GCGAACGCGAGCATCTCCGGCGACACGACGAGCGGCGGCCGCGCGCGGCTGCCCGCGGTGCTCGCACGGCTCAAGCCGGC CGTCGTCGTCGTCGAACTCGGCGCGAACGACGCGCTGCGCGGCGTGCCGCTCGCCGCGACCGAAGGCAACCTGCGCGAGA TCGTCGCGCAGGCGCGGCAGGCGCGCGCGCAGGTGCTGCTCGTCGGCATGTACGTGCCGTCGAACTACGGCCCGGACTAC ACGCAAAAGTTCCGCGGCGTCTACACGGGGCTGTCCAAGGAGATGCGCGTGCCGCTCGTGCCGTTCCTGCTCGCCGGCAT CGAGAACAAGCCCGACATGTTCCAGGCCGACCAGATCCATCCGACGCAGGCCGCGCAGCGCCAGTTGCTCGACAACGTAT GGCCGGCCCTCAAGCCGCTGCTGCGGACGTCATCGCACTGA
Upstream 100 bases:
>100_bases GCGAACCGTCAGGTCGATGCCAGCGAGAATCGTCAGCTCGCCGGCGGCGTCGGCGACACGCTTGCACACATTCCGTACTT CGATGATTGGATCGGTAATC
Downstream 100 bases:
>100_bases TCGCGCCGTGCCGGCATCTCGGTACTTCAGTACTTCGGTGCTTCGGTACTGCAACGCTTGATATGTCGATCCGCCGGCGG TGCCGGGCCGGCCGATACCA
Product: putative acyl-CoA thioesterase
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSMKRTVHWKAGATLAVVATFAGPASAATNAAPAPNADGGKPVIVVLGDSLSAEYGLPRDTGWVALMRARLAAERIDYSV ANASISGDTTSGGRARLPAVLARLKPAVVVVELGANDALRGVPLAATEGNLREIVAQARQARAQVLLVGMYVPSNYGPDY TQKFRGVYTGLSKEMRVPLVPFLLAGIENKPDMFQADQIHPTQAAQRQLLDNVWPALKPLLRTSSH
Sequences:
>Translated_226_residues MSMKRTVHWKAGATLAVVATFAGPASAATNAAPAPNADGGKPVIVVLGDSLSAEYGLPRDTGWVALMRARLAAERIDYSV ANASISGDTTSGGRARLPAVLARLKPAVVVVELGANDALRGVPLAATEGNLREIVAQARQARAQVLLVGMYVPSNYGPDY TQKFRGVYTGLSKEMRVPLVPFLLAGIENKPDMFQADQIHPTQAAQRQLLDNVWPALKPLLRTSSH >Mature_225_residues SMKRTVHWKAGATLAVVATFAGPASAATNAAPAPNADGGKPVIVVLGDSLSAEYGLPRDTGWVALMRARLAAERIDYSVA NASISGDTTSGGRARLPAVLARLKPAVVVVELGANDALRGVPLAATEGNLREIVAQARQARAQVLLVGMYVPSNYGPDYT QKFRGVYTGLSKEMRVPLVPFLLAGIENKPDMFQADQIHPTQAAQRQLLDNVWPALKPLLRTSSH
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=225, Percent_Identity=36.8888888888889, Blast_Score=141, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 23962; Mature: 23831
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKRTVHWKAGATLAVVATFAGPASAATNAAPAPNADGGKPVIVVLGDSLSAEYGLPRD CCCCCEEEECCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC TGWVALMRARLAAERIDYSVANASISGDTTSGGRARLPAVLARLKPAVVVVELGANDALR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCC GVPLAATEGNLREIVAQARQARAQVLLVGMYVPSNYGPDYTQKFRGVYTGLSKEMRVPLV CCCEECCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH PFLLAGIENKPDMFQADQIHPTQAAQRQLLDNVWPALKPLLRTSSH HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SMKRTVHWKAGATLAVVATFAGPASAATNAAPAPNADGGKPVIVVLGDSLSAEYGLPRD CCCCEEEECCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC TGWVALMRARLAAERIDYSVANASISGDTTSGGRARLPAVLARLKPAVVVVELGANDALR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCC GVPLAATEGNLREIVAQARQARAQVLLVGMYVPSNYGPDYTQKFRGVYTGLSKEMRVPLV CCCEECCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHH PFLLAGIENKPDMFQADQIHPTQAAQRQLLDNVWPALKPLLRTSSH HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]