| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812594
Identifier: 237812594
GI number: 237812594
Start: 2309343
End: 2309714
Strand: Direct
Name: 237812594
Synonym: GBP346_A2344
Alternate gene names: NA
Gene position: 2309343-2309714 (Clockwise)
Preceding gene: 237812593
Following gene: 237812595
Centisome position: 56.35
GC content: 63.71
Gene sequence:
>372_bases ATGAACCCCGTCTCCCTCTTTTGCATCGTCACGGGCGTGATGCTGAACGCCTGCGCGCAACTGCTGCTGAAAGCCGGCGT GCGCGCCGTTGGACACTTCGAATTCACCCGTGCGAACATTGTGCCCATCGGCTTCAAGATCGCGACCCAATTGCCGATCA TCGGCGGCCTCGGCTGCTACGTGCTCTCGGTGGTCGTGTGGATCGTCGGGCTGTCGCGGGTCGACGTGTCGGTCGCGTAT CCGATGCTCTCGCTCGGCTACGTCGTCAACGCGTTCGCCGCGTGGTACCTGTTCGGCGAGGTGCTGTCGGTGCAACGCCT CGTCGGCATCGGCATCATCCTGATCGGCGTGTTCGTGCTCGCGCGCAGCTGA
Upstream 100 bases:
>100_bases AGTTATCGGAGGCCGGCCTGCCGATGCGCGTCGTCGCACGCGACAACCGGCGCGTCGTCGTCGAGAAGCCGCAATCCTGA GCCGCGAAGGACCCGAATCG
Downstream 100 bases:
>100_bases CGCCCGCGCCCGGCCGACGCGCCGGCCGGACCGACAAAAAGTGACGTACCCGTTCCGGCGAACAGTGTTAAATGCGCGTG TCGGGCGGCGCCCGATTTCT
Product: small multidrug resistance protein
Products: NA
Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNPVSLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS
Sequences:
>Translated_123_residues MNPVSLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS >Mature_123_residues MNPVSLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13127; Mature: 13127
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVSLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEHHCCEEEECHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSVAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC >Mature Secondary Structure MNPVSLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEHHCCEEEECHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSVAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA