| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812555
Identifier: 237812555
GI number: 237812555
Start: 2272731
End: 2273591
Strand: Direct
Name: 237812555
Synonym: GBP346_A2304
Alternate gene names: NA
Gene position: 2272731-2273591 (Clockwise)
Preceding gene: 237812553
Following gene: 237812561
Centisome position: 55.45
GC content: 71.89
Gene sequence:
>861_bases ATGCGACTCATCAGTTGGAACGTCCAATGGGGACGGGACGCGAACGGAACGGTCGACCTCGCGCGCACCGTCGACGCCGC ACGCGGCCTCGGCGATTTCGACGTGCTGTGCGCGCAGGAGCTCACACGCGGCTTTCACGCGCTGCCGGGCGGCCCAAGCG GCGATCAGTACGCCGAGCTGGCCGCGCTCCTGCCGGGTTACGCGGTATTCGACGCGATCGGCGTCGATCTGCCGCCGCTC GAGCCGGGCGCGCCGCGCCGGCAATTCGGCAACGCGCTCGCCACGCGGCTGCCCGTCGAGCGCGCCCTGCGCCACGCGTT GCCGTGGCCGGCGAGCGCCGCCGCGCCGTCGATGCCCCGCTGCGCGCTCGAAGTCACGCTGCGCGCGCCGTTCGGGCCGC TGCGCGTCGTCGTCACGCATCTCGAATACTATTCGGCGCAGCAGCGGCTCGCACAAGTCGACGCGCTGCGGCGCCTGCAT CGCGAGGCGGCCGCGCATGCGCGCGCGAGCGCGCCGCCGGAAACGCCGGCAAGCCCGTTCGCGCCGTCGGCGCGCGCGGC CGACGCCATCGTCTGCGGCGACTTCAACAGCGCGTACCGCAGCGACGCGTACCAGCGCTTTCTCGCGCCGTTTCCGGATG CGCCGCGCTTCGTCGACGCCTGGCTCGCGCGCCATCCGGGAAAGACGCCGCCGATGACGGCGGGCGTCTACGACACCGCG CAATGGAGCGAGGGGCCGATGACGTGCGACTTCGCGTTCGTCACCGATACGCTCGTTCGCCGCCTATCGCGCTGCGAAAT CGACGGGACGGTGCGTGCGTCCGATCATCAGCCGATCGTGCTCGAATTGAGCGACGCGTAG
Upstream 100 bases:
>100_bases GAGAGGGGGACGGCTTCTGACACCAGCTTTTCCTGACGAACGATTGTGGGGGAAAGGCGAGATTGTAGACGAACGCCCGC CAAGCAACGGAGATTCGACG
Downstream 100 bases:
>100_bases CGACGCATAGCGGCGCGACGCGCAAGCGGACCGAAAGGGATCGAGCAGCGCGAGCGGCTCGAGCGGTGCAAATCGACGCC CGGCAAGCCGTGGCTGGCGA
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease / Exonuclease / Phosphatase
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA
Sequences:
>Translated_286_residues MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA >Mature_286_residues MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30976; Mature: 30976
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAEL CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH AALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPR HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC CALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPASPF EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCC >Mature Secondary Structure MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAEL CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH AALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPR HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC CALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPASPF EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA