Click here to switch to the map view.

The map label for this gene is tex [H]

Identifier: 237812533

GI number: 237812533

Start: 2248919

End: 2251243

Strand: Direct

Name: tex [H]

Synonym: GBP346_A2282

Alternate gene names: 237812533

Gene position: 2248919-2251243 (Clockwise)

Preceding gene: 237812528

Following gene: 237812535

Centisome position: 54.87

GC content: 68.65

Gene sequence:

>2325_bases
ATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCGACGAACTCTCGGTCCAGCCGCGGCAGGTCGCCGCGGC
GGTGCAACTCCTCGACGAAGGCTCCACCGTTCCGTTCATCGCCCGCTACCGGAAGGAAGTCACGGGCAATCTGGACGACA
CGCAGTTGCGCCAGCTCGAAGAGCGCCTGCTGTATCTGCGCGAGCTCGAGGAACGCCGCGCGACGATCATCGCGAGCATC
GACGAGCAGGGCAAGCTGACGGACGAACTGCGCGCGGCGATCGACGCGGCCGACAGCAAGCAGACGCTCGAGGATCTGTA
CCTGCCGTACAAGCCGAAGCGCCGCACGCGCGCGCAGATCGCCCGCGAAGCCGGGCTCGAGCCGCTCGCGCAGGCGCTCC
TCGCGAATCCGCTGCTCGATCCCCAGGCGGAAGCGGCCGCGTACGTGAACACGGATCGCGGCGTCGCCGACGTGAAGGCG
GCGCTCGACGGCGCGCGCGACATCCTGTCCGAGCAATTCGGCGAGACGGCCGAACTGCTCGGCAAGCTGCGCGACTATCT
GTTCGAGCGCGGCGTCGTGTCGTCGGCCGTCGTCGACGGCAAGCAAGGCGAGGAAGGCGAGAAATTCCGCGACTACTACG
ACTACTCGGAAACGATCAAGACCGTGCCGTCGCACCGCGCGCTCGCGCTGTTCCGCGGCCGCAACGCCGGCGTGCTGACC
GTGAAGCTCGGCCTCGGCGAAGAGCTCGATGCGCAGGTGCCGCACCCGGGCGAGGCGATGATCGCGCGCCATTTCGGGAT
CGCGAACCAGAACCGGCCGGCCGACAAGTGGCTGTCCGACGTGTGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCACA
TCGAAACCGAATTGCTCACACAATTGCGCGAGACGGCCGAGCATGAGGCGATCCGCGTGTTCGCGCGCAACCTGAAGGAC
CTGCTGCTCGCCGCGCCCGCAGGCCCGAAGGCCGTGATCGGTCTCGACCCCGGCCTGCGCACGGGCGTGAAGGTCGCCGT
CGTCGACCGCACGGGCAAGCTGCTCGCGACCGACACGATCTATCCGCACGAGCCGCGCCGCGACTGGGACGGCTCGCTCG
CGAAGCTCGCGCGCCTCGCCGCGCAGACGCAGGCCGAGCTCGTCAGCATCGGCAACGGCACCGCGTCGCGCGAAACCGAC
AAGCTCGCGAGCGAGCTGATCGCCAAGCATCCCGAGCTCAAGCTGCAGAAGATCGTCGTGTCGGAGGCGGGCGCGTCCGT
CTACTCGGCGTCGGAGCTCGCCGCGAAGGAATTCCCCGAGCTCGACGTGTCGCTGCGCGGCGCGGTATCGATCGCGCGCC
GGCTGCAGGATCCGCTCGCGGAGCTCGTGAAGATCGAGCCGAAGGCGATCGGCGTCGGCCAGTATCAGCACGACGTGAAC
CAGCGCGAGCTCGCGCGCTCGCTCGACGCGGTCGTCGAGGATTGCGTGAACGCGGTCGGCGTCGACGCGAACACCGCGTC
TGCCGCCCTCCTCGCGCGCGTGTCGGGCCTGAACTCGACGCTCGCGCGCAACATCGTCGACTATCGCGACGCGAACGGCC
CGTTCCCGTCGCGCGAGCACCTGCGCCGCGTGCCGCGCCTCGGCGACAAGACGTTCGAGCAGGCGGCGGGCTTCCTGCGC
ATCAACGGCGGCGAGAATCCGCTCGACCGCTCGTCGGTGCACCCGGAGGCATACCCCGTCGTCGAGCGGATGCTCGCGAA
GATCAGCAAGCGCATCGACGACGTGCTAGGCAACCGCGACGCGCTCGCGGGCCTGTCGCCCGCGGAATTCGTCGATGAAC
GTTTCGGTTTGCCGACCGTGCGCGACATCCTGTCCGAGCTCGAGAAGCCCGGCCGCGATCCGCGCCCCGAATTCAAGACC
GCGACGTTCCGCGAAGGTGTCGAGAAAGTGTCGGATCTCGCGCCGGGGATGGTGCTCGAAGGCGTCGTGACGAACGTGGC
GGCATTCGGCGCATTCGTCGACATCGGCGTGCATCAGGACGGGCTCGTCCACGTATCCGCGATGTCGACGAAATTCATCA
AGGATCCTCACGAAATCGTGAAGGCCGGCCAGGTCGTCAAGGTGAAGGTGCTCGACGTCGATGTGAAGCGCCAGCGGATT
TCGCTGACGATGCGGCTCGACGACGACGCGGCGCCAAGCGCGCCCGGCAATCGCGGCGGCGCCGAGCGCGGCGCAATGCG
CGGCGGCGCCCGGGCGCAGCGCTCGCGCGAGCCGGAACCGGCGGGCGCGATGGCCGCCGCGTTCGCAAAGCTCAGGCAGC
GTTGA

Upstream 100 bases:

>100_bases
TTATGGCAAAATGCCCCGCTCCATTCACCCGCCCGGTCCGGCCGACGGCGCAGCCGGCCGGACCGGGCGATTTCTGCAGG
CAGTAGACGCACATCACGAC

Downstream 100 bases:

>100_bases
GCGCGCTGCGCCGGTAGCGAAAAAGCCCGCTTCGCAGCGGGCTTTTTTTCGCCGTGAAACCGGCGTCGGCGTGACGAATC
GACATCGGGCACCGGCAACG

Product: tex domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MTETVALKIVQRIADELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEERRATIIASI
DEQGKLTDELRAAIDAADSKQTLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVNTDRGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLFERGVVSSAVVDGKQGEEGEKFRDYYDYSETIKTVPSHRALALFRGRNAGVLT
VKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIETELLTQLRETAEHEAIRVFARNLKD
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSLAKLARLAAQTQAELVSIGNGTASRETD
KLASELIAKHPELKLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASAALLARVSGLNSTLARNIVDYRDANGPFPSREHLRRVPRLGDKTFEQAAGFLR
INGGENPLDRSSVHPEAYPVVERMLAKISKRIDDVLGNRDALAGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKT
ATFREGVEKVSDLAPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEIVKAGQVVKVKVLDVDVKRQRI
SLTMRLDDDAAPSAPGNRGGAERGAMRGGARAQRSREPEPAGAMAAAFAKLRQR

Sequences:

>Translated_774_residues
MTETVALKIVQRIADELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEERRATIIASI
DEQGKLTDELRAAIDAADSKQTLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVNTDRGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLFERGVVSSAVVDGKQGEEGEKFRDYYDYSETIKTVPSHRALALFRGRNAGVLT
VKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIETELLTQLRETAEHEAIRVFARNLKD
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSLAKLARLAAQTQAELVSIGNGTASRETD
KLASELIAKHPELKLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASAALLARVSGLNSTLARNIVDYRDANGPFPSREHLRRVPRLGDKTFEQAAGFLR
INGGENPLDRSSVHPEAYPVVERMLAKISKRIDDVLGNRDALAGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKT
ATFREGVEKVSDLAPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEIVKAGQVVKVKVLDVDVKRQRI
SLTMRLDDDAAPSAPGNRGGAERGAMRGGARAQRSREPEPAGAMAAAFAKLRQR
>Mature_773_residues
TETVALKIVQRIADELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEERRATIIASID
EQGKLTDELRAAIDAADSKQTLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVNTDRGVADVKAA
LDGARDILSEQFGETAELLGKLRDYLFERGVVSSAVVDGKQGEEGEKFRDYYDYSETIKTVPSHRALALFRGRNAGVLTV
KLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIETELLTQLRETAEHEAIRVFARNLKDL
LLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSLAKLARLAAQTQAELVSIGNGTASRETDK
LASELIAKHPELKLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQ
RELARSLDAVVEDCVNAVGVDANTASAALLARVSGLNSTLARNIVDYRDANGPFPSREHLRRVPRLGDKTFEQAAGFLRI
NGGENPLDRSSVHPEAYPVVERMLAKISKRIDDVLGNRDALAGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTA
TFREGVEKVSDLAPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEIVKAGQVVKVKVLDVDVKRQRIS
LTMRLDDDAAPSAPGNRGGAERGAMRGGARAQRSREPEPAGAMAAAFAKLRQR

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=793, Percent_Identity=34.1740226986129, Blast_Score=407, Evalue=1e-113,
Organism=Homo sapiens, GI27597090, Length=402, Percent_Identity=24.3781094527363, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI87082262, Length=752, Percent_Identity=63.4308510638298, Blast_Score=933, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=43.421052631579, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=736, Percent_Identity=30.2989130434783, Blast_Score=267, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17552892, Length=260, Percent_Identity=28.0769230769231, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321552, Length=217, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI62484314, Length=757, Percent_Identity=31.8361955085865, Blast_Score=370, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 84585; Mature: 84454

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETVALKIVQRIADELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
ERLLYLRELEERRATIIASIDEQGKLTDELRAAIDAADSKQTLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AREAGLEPLAQALLANPLLDPQAEAAAYVNTDRGVADVKAALDGARDILSEQFGETAELL
HHHHCHHHHHHHHHHCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GKLRDYLFERGVVSSAVVDGKQGEEGEKFRDYYDYSETIKTVPSHRALALFRGRNAGVLT
HHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
VKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIETELLT
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
QLRETAEHEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCC
YPHEPRRDWDGSLAKLARLAAQTQAELVSIGNGTASRETDKLASELIAKHPELKLQKIVV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
SEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
QRELARSLDAVVEDCVNAVGVDANTASAALLARVSGLNSTLARNIVDYRDANGPFPSREH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
LRRVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERMLAKISKRIDDVLGNRD
HHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ALAGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFREGVEKVSDLAPGMVLE
HHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
GVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEIVKAGQVVKVKVLDVDVKRQRI
HHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHCCHHHHHHCCCEEEEEEEEECCCCEEE
SLTMRLDDDAAPSAPGNRGGAERGAMRGGARAQRSREPEPAGAMAAAFAKLRQR
EEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TETVALKIVQRIADELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
ERLLYLRELEERRATIIASIDEQGKLTDELRAAIDAADSKQTLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AREAGLEPLAQALLANPLLDPQAEAAAYVNTDRGVADVKAALDGARDILSEQFGETAELL
HHHHCHHHHHHHHHHCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GKLRDYLFERGVVSSAVVDGKQGEEGEKFRDYYDYSETIKTVPSHRALALFRGRNAGVLT
HHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
VKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIETELLT
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
QLRETAEHEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCC
YPHEPRRDWDGSLAKLARLAAQTQAELVSIGNGTASRETDKLASELIAKHPELKLQKIVV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
SEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
QRELARSLDAVVEDCVNAVGVDANTASAALLARVSGLNSTLARNIVDYRDANGPFPSREH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
LRRVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERMLAKISKRIDDVLGNRD
HHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ALAGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFREGVEKVSDLAPGMVLE
HHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
GVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEIVKAGQVVKVKVLDVDVKRQRI
HHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHCCHHHHHHCCCEEEEEEEEECCCCEEE
SLTMRLDDDAAPSAPGNRGGAERGAMRGGARAQRSREPEPAGAMAAAFAKLRQR
EEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]