Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812497

Identifier: 237812497

GI number: 237812497

Start: 2209314

End: 2210120

Strand: Direct

Name: 237812497

Synonym: GBP346_A2246

Alternate gene names: NA

Gene position: 2209314-2210120 (Clockwise)

Preceding gene: 237812496

Following gene: 237812502

Centisome position: 53.9

GC content: 73.61

Gene sequence:

>807_bases
ATGTTGATTTCTCTGGTGTTGGGCAGCATCGTCGGCGCGGTGCTGGGGCTGACGGGCGCGGGCGGCGGCATTCTCGCCGT
GCCGGCGCTCGTCGTCGGAATGGGCTGGCCGATGCAGCAGGCGACGCCCGTGGCGCTCGTCGCGGTCGCGGGCAGCGCCG
CGCTCGGCGCGCTCGAAGGCTTTCGGCGCGGGCTGGTGCGCTATCGCGCGGCATTCCTGATGGCGGCGGCCGGCGTGCCG
CTGACGACGCTCGGCGTGCGCGTCGCGCACAGGCTGCCGCAGCGCGTGCTGCTCGCGCTCTTCGCGCTCGTGATGCTCGT
CGTCGCGGTGCGCCTGCTGCGCCAGGCGCTCAGGCATGCCGCCGGCGAGCCGGCTTGCTCGCCGCTGTGCGTCGGCCGGG
TCAATCCGGACACGGGGCGCCTCGTCTGGTCGTGGCCCGCCGGCATCGCGCTCGCGTCGACGGGCGCGCTGACGGGGCTG
ATGACGGGCCTGCTCGGCGTCGGCGGCGGCTTCGTGATCGTGCCGATGCTGCGCAAGTTCACGAACGTGACGATGCACGG
CATCGTCGCGACGTCGCTGATGGTGATCGCGCTCGTCGGCACGGGCGGCGTGATCGCGACGATCGCGAGCGGCACGCCCG
CGCCGCTCGACGTCACGCTGTGGTTCACCGCGACGACCGCGCTCGGCATGGCGGCCGGACGCTGGGTATCGCGCTACCTG
TCCGCGCGGCACGTGCAACTGGGCTTCGCCGCCGCGCTCGTGTGCGTCGCGGCGGGGCTCCTCGCGAAAGCGGCGCTCGG
TTTCTGA

Upstream 100 bases:

>100_bases
TTACTGGCAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAACCCGAGATCGTCGGCTGACCGCCGCGCTTTGACGACC
CTTGTCCGGAACGGCGCAGC

Downstream 100 bases:

>100_bases
GGCCGCAAGCGGCGCGCAGAGCGGCCGTGCATGCGCGCGACGGCAAAACGGCGCGCAGAGCGCGCCAGCGCGTTGACGAA
AAAAACCCGGGCGGTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP
LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL
MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL
SARHVQLGFAAALVCVAAGLLAKAALGF

Sequences:

>Translated_268_residues
MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP
LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL
MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL
SARHVQLGFAAALVCVAAGLLAKAALGF
>Mature_268_residues
MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP
LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL
MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL
SARHVQLGFAAALVCVAAGLLAKAALGF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27057; Mature: 27057

Theoretical pI: Translated: 12.29; Mature: 12.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEG
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
FRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPMLRKF
CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
SARHVQLGFAAALVCVAAGLLAKAALGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEG
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
FRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPMLRKF
CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
SARHVQLGFAAALVCVAAGLLAKAALGF
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA