| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812390
Identifier: 237812390
GI number: 237812390
Start: 2113391
End: 2113732
Strand: Reverse
Name: 237812390
Synonym: GBP346_A2138
Alternate gene names: NA
Gene position: 2113732-2113391 (Counterclockwise)
Preceding gene: 237812391
Following gene: 237812387
Centisome position: 51.57
GC content: 61.7
Gene sequence:
>342_bases TTGCCGGATGGGGAAGAGAAAGAAGGCGCGGGGTCGATGGAGTTTGTGACGCTCTGTCTCGAAGACTGGCAAGCAGCGCT GAATCGCGGGCTCGATGTGCTGTCGTTCTCAGCCCCGCCGGCGTTCCTGACGGTGTGCCCGAATGTTTTTCAGCCACTTT TCGCACAAGCGGCCGACGATCTGGACGCCGTACACGGGCACGCCGGGTATGCGGTGAATCTGTCACTGCTGCGGCGCGAT CCGAACGCGGCGTCGGAGTATTTTCTGGCTCGTCGCTATGGTCCGGGGCTCGATGTAGGTGACCCAGTTCTCGTGGTCCC TTCCCGAATGACGAGGCCGTGA
Upstream 100 bases:
>100_bases TGCAAGCTGAACGGGCCGCATCGGCGAATGAGCCGAGCCGGATCACTCGTTTTTCTCGCTCGCGAAGGACATTCCGTCTG ATGATCTATTCGTCGTCGGA
Downstream 100 bases:
>100_bases TCAAGCTGCTCTGGCTGTCCTGGCAACCACGCGTCTTCGGTTCGTTGAAGGCCTCGAGCCAGAACTTGGCGTCCTCGGTC TGCTCGATCCAGCGGCCCAG
Product: bacteriophage gp31 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPDGEEKEGAGSMEFVTLCLEDWQAALNRGLDVLSFSAPPAFLTVCPNVFQPLFAQAADDLDAVHGHAGYAVNLSLLRRD PNAASEYFLARRYGPGLDVGDPVLVVPSRMTRP
Sequences:
>Translated_113_residues MPDGEEKEGAGSMEFVTLCLEDWQAALNRGLDVLSFSAPPAFLTVCPNVFQPLFAQAADDLDAVHGHAGYAVNLSLLRRD PNAASEYFLARRYGPGLDVGDPVLVVPSRMTRP >Mature_112_residues PDGEEKEGAGSMEFVTLCLEDWQAALNRGLDVLSFSAPPAFLTVCPNVFQPLFAQAADDLDAVHGHAGYAVNLSLLRRDP NAASEYFLARRYGPGLDVGDPVLVVPSRMTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12205; Mature: 12074
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGEEKEGAGSMEFVTLCLEDWQAALNRGLDVLSFSAPPAFLTVCPNVFQPLFAQAADD CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHH LDAVHGHAGYAVNLSLLRRDPNAASEYFLARRYGPGLDVGDPVLVVPSRMTRP HHHHCCCCCEEEEHEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure PDGEEKEGAGSMEFVTLCLEDWQAALNRGLDVLSFSAPPAFLTVCPNVFQPLFAQAADD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHH LDAVHGHAGYAVNLSLLRRDPNAASEYFLARRYGPGLDVGDPVLVVPSRMTRP HHHHCCCCCEEEEHEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA