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The map label for this gene is ntaR [H]

Identifier: 237812387

GI number: 237812387

Start: 2111637

End: 2112407

Strand: Reverse

Name: ntaR [H]

Synonym: GBP346_A2135

Alternate gene names: 237812387

Gene position: 2112407-2111637 (Counterclockwise)

Preceding gene: 237812390

Following gene: 237812386

Centisome position: 51.54

GC content: 61.22

Gene sequence:

>771_bases
GTGTTCCAACGCGTGGGCTTCGGCGGACCGATGCGACGCGCGGGCTTTCGTCCCTTTATTTTTTTGCCGCCTATGTCGAA
TCTCAAAATCGAACGCAACGCCAAGACGCTTCGTGAGCTCACGCTGGACAAGCTGCGTGGCGCGATCGTGCAAGGGTACT
TCCGTCCAGGCGAGCGGCTTGTCGAAAGGACGTTATGCGACGAGCTCGGCGTGAGTCGAACCGTCGTGCGCGAAGTGCTA
AGGCACCTGGAAACGGAAGGGCTCGTCGAAATCGCGGTGGGCCACGGGCCGATTGTCGCGCGCCTGGATCCTGCGTTGAT
TGGGGAAATTTACGAATTGCGCGGTCTGCTGGAGGCCAATGTGGCGCGTGCGTGCGCCGAGCGGGCCACGCCCGAGCTTG
TGGCGAAGTTGCGCAACATCCGCACGATGATCGAGGACGCCTTTGATAAGGAGGATCTTTCCCGCGTGCTCGAACATACG
GAGCAGTTTTACGACGCAATGTTCGAAGGAGCGGGCAAGCAGGTGTCGCTGACCGTCGTCAAATCGCTCAACGCACGGAT
CAACCAGTTGCGCGCACTGACCATTGCCGTCCCCGGCCGCAGCGGGGAGTCGAACCGCGAAATGAACGCGCTGCTCGACG
CGATCGAACGGCAAGATCCAGAAGGCGCATCGGCTGCATCGGCCGCGCACATACGGCGCGCGGCCGAACTTGCGTTGAAC
GCGCTGGAGGAGAAACAGAAAGAAGAGGAGCAGGTGCGCAGCAAAGCCTGA

Upstream 100 bases:

>100_bases
GTTCGGGTTCCTCGGATAGTGCTGGCGCATGGCTCTGGCAGGACTTGCTCGACGCGGAGGACGGATGAGCAAAAGAGGTA
AGAGGATCGACGATAATACG

Downstream 100 bases:

>100_bases
AGGTTTCTCGTCGCCGTTCCGTCCAGCCGCCCTGATTCCGGCGGCTTTTGTTTTTGTACGCCAGGCGGCTAGTACCCCCG
CTTGTCAGCTTCCGGAGGCA

Product: transcriptional regulator, GntR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFQRVGFGGPMRRAGFRPFIFLPPMSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERLVERTLCDELGVSRTVVREVL
RHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEANVARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHT
EQFYDAMFEGAGKQVSLTVVKSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALN
ALEEKQKEEEQVRSKA

Sequences:

>Translated_256_residues
MFQRVGFGGPMRRAGFRPFIFLPPMSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERLVERTLCDELGVSRTVVREVL
RHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEANVARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHT
EQFYDAMFEGAGKQVSLTVVKSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALN
ALEEKQKEEEQVRSKA
>Mature_256_residues
MFQRVGFGGPMRRAGFRPFIFLPPMSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERLVERTLCDELGVSRTVVREVL
RHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEANVARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHT
EQFYDAMFEGAGKQVSLTVVKSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALN
ALEEKQKEEEQVRSKA

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994955, Length=219, Percent_Identity=29.6803652968037, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28524; Mature: 28524

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQRVGFGGPMRRAGFRPFIFLPPMSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERL
CCCCCCCCCCHHHCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VERTLCDELGVSRTVVREVLRHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEAN
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHH
VARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHTEQFYDAMFEGAGKQVSLTVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
KSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALN
HHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ALEEKQKEEEQVRSKA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFQRVGFGGPMRRAGFRPFIFLPPMSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERL
CCCCCCCCCCHHHCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VERTLCDELGVSRTVVREVLRHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEAN
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHH
VARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHTEQFYDAMFEGAGKQVSLTVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
KSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALN
HHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ALEEKQKEEEQVRSKA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA