| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yhbW [C]
Identifier: 237812383
GI number: 237812383
Start: 2107778
End: 2108821
Strand: Reverse
Name: yhbW [C]
Synonym: GBP346_A2131
Alternate gene names: 237812383
Gene position: 2108821-2107778 (Counterclockwise)
Preceding gene: 237812384
Following gene: 237812382
Centisome position: 51.45
GC content: 61.02
Gene sequence:
>1044_bases ATGAAGTTTTCGCTGTTCCTGCATATGGAGCGATACGACGCGAAGACGTCGCATCGCGACCTGTTCGACCAGATGACCGA ACTCGTGCAGCTCGCCGAGCGCGGCGGGTTCGAAACGGCATGGATTGGCGAGCACCACGCGATGGAATTCACGATCGCGC CGAATCCGTTCGTCAATCTGTCCTACCTCGCCGCCAAGACCGAGCGTATTCGCCTCGGCACGGGCACGGTGATCGCGCCG TTCTGGCATCCGATTGCGCTGGCCGGTGAAGCGGGCATGGTTGATGTCGCGAGCAACGGCCGGCTTGATCTCGGTATCGC ACGTGGCGCTTATTCGTTCGAGTACGAGCGTCTGCTGCCGGGGCTCGATGCGATGAGCGCGGGTGCGCGGATGCGCGAAC TCGTCCCCGCATTGCGCCAGCTCTTCAAAGGCGATTACGCGCATCAGGGCGAGTTCTGGTCATGGCCTTCATCGACGCCG GTGCCGCGTCCGATCCAGCAGCCGCATCCGCCGATGTGGCTCGCCGCGCGAGATCCAAACTCCCATGCGTTCGCGGTCGC CCATGGCTGCAATGTGCAGGTGACGTCGCTGGCGGCGGGCGATGCCGAAGTGGTGAGCCTGATGGAGCGTTTCAACGCTG CATGTGCCGCCAATCCGCAGGTGCCGCGGCCTGAAGTGATGATGCTGATGCACACGTTTGTCGGCGCGAATGCCGCGGAA GTGGATGCCGCCGTCGAAGACCTCGCGCGCTTCTATCGGTACTTCAGTAAGTGGTTCAAGAACGAACGCCCGATCGAGCA GGGATTCATCGAGTCTCTGACCGACGTTGACGTCGAGATGTTCCCGCAGTATTCGCCCGAGAATATTCGCAAGAACCTCG TCATCGGCGAGCCGAAGCAAGTCATCGAGCGTTTGACGCGTTACGAAGCACTCGGCTACGACCAATACAGCTTCTGGCTC GACAGCCACATGAGCTTCGAGCGCAAGCGTAAATCGGTCGAGCTGTTCATCTCCGAAGTGATGCCGGCATTCGGCAAGCG TTGA
Upstream 100 bases:
>100_bases GCACTGCACGAATTCATTAATCGAGAGCGATTGACGCGCGGCGAATGGTGCGCTGCGGTAACGAGGTCACCGTGCTGCCC GCGATAGGAGATGAACCATC
Downstream 100 bases:
>100_bases TATCGAGCCTTCCGGCCAATTTCACGCAGGGAGCGGGCTAGAAATGTTGCAACGATTTCAGCAGTACATCGACGGTACGT TCGAACATGCCGCCAGCGAG
Product: glucose-6-phosphate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKFSLFLHMERYDAKTSHRDLFDQMTELVQLAERGGFETAWIGEHHAMEFTIAPNPFVNLSYLAAKTERIRLGTGTVIAP FWHPIALAGEAGMVDVASNGRLDLGIARGAYSFEYERLLPGLDAMSAGARMRELVPALRQLFKGDYAHQGEFWSWPSSTP VPRPIQQPHPPMWLAARDPNSHAFAVAHGCNVQVTSLAAGDAEVVSLMERFNAACAANPQVPRPEVMMLMHTFVGANAAE VDAAVEDLARFYRYFSKWFKNERPIEQGFIESLTDVDVEMFPQYSPENIRKNLVIGEPKQVIERLTRYEALGYDQYSFWL DSHMSFERKRKSVELFISEVMPAFGKR
Sequences:
>Translated_347_residues MKFSLFLHMERYDAKTSHRDLFDQMTELVQLAERGGFETAWIGEHHAMEFTIAPNPFVNLSYLAAKTERIRLGTGTVIAP FWHPIALAGEAGMVDVASNGRLDLGIARGAYSFEYERLLPGLDAMSAGARMRELVPALRQLFKGDYAHQGEFWSWPSSTP VPRPIQQPHPPMWLAARDPNSHAFAVAHGCNVQVTSLAAGDAEVVSLMERFNAACAANPQVPRPEVMMLMHTFVGANAAE VDAAVEDLARFYRYFSKWFKNERPIEQGFIESLTDVDVEMFPQYSPENIRKNLVIGEPKQVIERLTRYEALGYDQYSFWL DSHMSFERKRKSVELFISEVMPAFGKR >Mature_347_residues MKFSLFLHMERYDAKTSHRDLFDQMTELVQLAERGGFETAWIGEHHAMEFTIAPNPFVNLSYLAAKTERIRLGTGTVIAP FWHPIALAGEAGMVDVASNGRLDLGIARGAYSFEYERLLPGLDAMSAGARMRELVPALRQLFKGDYAHQGEFWSWPSSTP VPRPIQQPHPPMWLAARDPNSHAFAVAHGCNVQVTSLAAGDAEVVSLMERFNAACAANPQVPRPEVMMLMHTFVGANAAE VDAAVEDLARFYRYFSKWFKNERPIEQGFIESLTDVDVEMFPQYSPENIRKNLVIGEPKQVIERLTRYEALGYDQYSFWL DSHMSFERKRKSVELFISEVMPAFGKR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 39311; Mature: 39311
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSLFLHMERYDAKTSHRDLFDQMTELVQLAERGGFETAWIGEHHAMEFTIAPNPFVNL CEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCH SYLAAKTERIRLGTGTVIAPFWHPIALAGEAGMVDVASNGRLDLGIARGAYSFEYERLLP HHHHHCCCEEEECCCCEECCCCCCHHCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHCC GLDAMSAGARMRELVPALRQLFKGDYAHQGEFWSWPSSTPVPRPIQQPHPPMWLAARDPN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC SHAFAVAHGCNVQVTSLAAGDAEVVSLMERFNAACAANPQVPRPEVMMLMHTFVGANAAE CCEEEEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCCHHH VDAAVEDLARFYRYFSKWFKNERPIEQGFIESLTDVDVEMFPQYSPENIRKNLVIGEPKQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHCCCCCCCHHH VIERLTRYEALGYDQYSFWLDSHMSFERKRKSVELFISEVMPAFGKR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFSLFLHMERYDAKTSHRDLFDQMTELVQLAERGGFETAWIGEHHAMEFTIAPNPFVNL CEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCH SYLAAKTERIRLGTGTVIAPFWHPIALAGEAGMVDVASNGRLDLGIARGAYSFEYERLLP HHHHHCCCEEEECCCCEECCCCCCHHCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHCC GLDAMSAGARMRELVPALRQLFKGDYAHQGEFWSWPSSTPVPRPIQQPHPPMWLAARDPN CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC SHAFAVAHGCNVQVTSLAAGDAEVVSLMERFNAACAANPQVPRPEVMMLMHTFVGANAAE CCEEEEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCCHHH VDAAVEDLARFYRYFSKWFKNERPIEQGFIESLTDVDVEMFPQYSPENIRKNLVIGEPKQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHCCCCCCCHHH VIERLTRYEALGYDQYSFWLDSHMSFERKRKSVELFISEVMPAFGKR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8796346 [H]