Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812381

Identifier: 237812381

GI number: 237812381

Start: 2105878

End: 2106192

Strand: Reverse

Name: 237812381

Synonym: GBP346_A2129

Alternate gene names: NA

Gene position: 2106192-2105878 (Counterclockwise)

Preceding gene: 237812382

Following gene: 237812380

Centisome position: 51.39

GC content: 58.1

Gene sequence:

>315_bases
ATGTTCTACGAAATTCGCACGTACCGCGTCAAGACGGGCGCAGTGCTGGCCTATCTGAAGCTCGTGGAAGAGGAGGGCAT
CGAACTGCAGAAGCGGTATCTCGGGCAACTGGTCGGCTACTTCCATTCGGAAATCGGCCCGTTGAACCAGATCGTTCATA
TCTGGGCCTATCCGAGCCTGGACGAACGCGAGCGCCGACGCGCGGCGCTCGTCGAAGACCCGGCTTGGCGAGTCTTCGCA
CCGAAGATTCAAGCGCTGATGGAAGAGATGGAAAGCAAGATCATGAGGCCGGCCGCTTTTTCGCCGCTCAAATGA

Upstream 100 bases:

>100_bases
GCCGATCGCCGATCCGTTCGTGATGCGCTGAACGAACGAATCGATGCGGTCACGCAACGCGTGCCGTTCACGCACGCGCT
TGAAAGGGAGAGGAGTCGGC

Downstream 100 bases:

>100_bases
AGCTACGGCAATGCAATGGGTTCGCGGACATCGTGGTTCGATGATTTAAGAACTATTCAGGAGACAAGCATGAACAGCAA
GAGCGTTTTTCGTCAGGCGA

Product: nipsnap superfamily

Products: NA

Alternate protein names: NIPSNAP Family Containing Protein; NIPSNAP Domain-Containing Protein; Nipsnap Family Containing Protein; Nipsnap; NIPSNAP Superfamily; NipSnap

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFYEIRTYRVKTGAVLAYLKLVEEEGIELQKRYLGQLVGYFHSEIGPLNQIVHIWAYPSLDERERRRAALVEDPAWRVFA
PKIQALMEEMESKIMRPAAFSPLK

Sequences:

>Translated_104_residues
MFYEIRTYRVKTGAVLAYLKLVEEEGIELQKRYLGQLVGYFHSEIGPLNQIVHIWAYPSLDERERRRAALVEDPAWRVFA
PKIQALMEEMESKIMRPAAFSPLK
>Mature_104_residues
MFYEIRTYRVKTGAVLAYLKLVEEEGIELQKRYLGQLVGYFHSEIGPLNQIVHIWAYPSLDERERRRAALVEDPAWRVFA
PKIQALMEEMESKIMRPAAFSPLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12198; Mature: 12198

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYEIRTYRVKTGAVLAYLKLVEEEGIELQKRYLGQLVGYFHSEIGPLNQIVHIWAYPSL
CCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
DERERRRAALVEDPAWRVFAPKIQALMEEMESKIMRPAAFSPLK
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFYEIRTYRVKTGAVLAYLKLVEEEGIELQKRYLGQLVGYFHSEIGPLNQIVHIWAYPSL
CCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
DERERRRAALVEDPAWRVFAPKIQALMEEMESKIMRPAAFSPLK
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA