| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812336
Identifier: 237812336
GI number: 237812336
Start: 2050504
End: 2051214
Strand: Direct
Name: 237812336
Synonym: GBP346_A2084
Alternate gene names: NA
Gene position: 2050504-2051214 (Clockwise)
Preceding gene: 237812335
Following gene: 237812339
Centisome position: 50.03
GC content: 66.95
Gene sequence:
>711_bases TTGAGCCCGTGGCGCGGCAACACGCCGCCGTGCCGGTCCGCAACGCTGCCCGTCCTGCGCATCTTCGCAATGGAAACCCG AGACTTGGTCACCTGGCTGGCAACCGATCTGACGCCGGTTGACCCCGGCGCAGTTTTGCAGCGGCTCTACCACGCGCTCC TCGTCGGCTTCGCCGGCAGCACCGCCCTCCTCGTCGCGTTGTATGGCATCCGCAGCGATATGCCCCAATTGATCCTGACG ACGATGTTCTGGGTGCGGTTCGCGTTCCCACTCGCCGTCGTCTTCTCGGCAACGCGGCTCGCCGAGCGCCTTGGCCGCCC TGGCGCGCGACTGTGTTCCGTTGGGCTTGCGACCGCGCTGCCGGTTGCCGCGATGCTGCTTGCCACGGGCGGCGTGTTGA TTGCGACTCCGCCCGGCTACCGGCTGCAACTGGTGCTCGGAACGACGTGGCGGACCACGGTCGTGGACATCGTGCTGCTG TCGCTGCCGCCGCTCGCCGCCGCGTTGCATGCGATGAAGCAACTCGCGCCAACGCGTCTCGTGCTCGCCGGCGCGGGTGC CGGCCTTCTTGCCGGCGCACAGGCGCTCGTCGTCTATTCGCTCTACTGCGCCGAGATGTCGATGCCGTTCTGGGGTGTCT GGTACATGTTGTCGCTCATGCTAACGATGGCCCTCGGTGCGATGCTTGCTTCGATCTGGCTGCGCTGGTGA
Upstream 100 bases:
>100_bases CGATCCATCTGACGTGGGCGGCAATGGCCCTCGGTATCGCGGCGTGGGGCCCGGGCCGCCTCTCGCTCGACTATCTGCTC GGTGATCGCGCGCCGCGCAG
Downstream 100 bases:
>100_bases GGGGCTGGGGCGCCGTGCCTACCAGCGCAGCCAGATCGGAGCGACGAGTGCGCCGAGTGCGGCCGGCAACGCCATCCCAA GCAGATACCAGACGCCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGAVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILT TMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLL SLPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTMALGAMLASIWLRW
Sequences:
>Translated_236_residues MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGAVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILT TMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLL SLPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTMALGAMLASIWLRW >Mature_235_residues SPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGAVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILTT MFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLS LPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTMALGAMLASIWLRW
Specific function: Unknown
COG id: COG4944
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25381; Mature: 25250
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGAVLQRLYHALLVGFAGS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH TALLVALYGIRSDMPQLILTTMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLSLPPLAAALHAMKQLAPTRL HHHHHHHHCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHE VLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTMALGAMLASIWLRW EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGAVLQRLYHALLVGFAGS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH TALLVALYGIRSDMPQLILTTMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLSLPPLAAALHAMKQLAPTRL HHHHHHHHCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHE VLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTMALGAMLASIWLRW EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA