| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812335
Identifier: 237812335
GI number: 237812335
Start: 2050004
End: 2050507
Strand: Direct
Name: 237812335
Synonym: GBP346_A2083
Alternate gene names: NA
Gene position: 2050004-2050507 (Clockwise)
Preceding gene: 237812334
Following gene: 237812336
Centisome position: 50.02
GC content: 66.67
Gene sequence:
>504_bases ATGTCCGATCGACACACCGCCAATCGCGCGCCGCTGCGCGCGCTCACCTCGCTTGTCAGCCGCGTGCGGCATGGTATCCA GTGGCTCGCCCACCCGACGCTTGCGCAGTTCGCATTGCGACTCGCGCTTGCGGTGCCGTTCTGGAAATCTGGCATTCTCA AGTGGAACGGCTTCCTGCGGCTCAACGACACTGCGATCGATTTGTTCACGAGCGAATTCCAGTTGCATCTGCCCGGCGGC CCATACCCGTTCCCCGCACCGGCCGTGTTCGCCTTTCTGTCCGGCTGCGGGGAGGTGCTGTTCCCGGTACTGCTGGCGCT CGGCCTCGGCACGCGATTCGCGGCGGCCGGCCTGTTCGTGATGACCTGTGTTGTCGAGCTGACGGTGCCGGACGGCTGGC CGATCCATCTGACGTGGGCGGCAATGGCCCTCGGTATCGCGGCGTGGGGCCCGGGCCGCCTCTCGCTCGACTATCTGCTC GGTGATCGCGCGCCGCGCAGTTGA
Upstream 100 bases:
>100_bases TCACCCTCGAAGACAATCCCGCCTTCGATCTCCCGGCCAGCTTGCGCGGCATGATCGAAGCCGGCGTGTTTACCGCCATC CATTCCGGAGCCTGACCGCC
Downstream 100 bases:
>100_bases GCCCGTGGCGCGGCAACACGCCGCCGTGCCGGTCCGCAACGCTGCCCGTCCTGCGCATCTTCGCAATGGAAACCCGAGAC TTGGTCACCTGGCTGGCAAC
Product: DoxX family protein
Products: NA
Alternate protein names: ThiosulphateQuinone Oxidoreductase; DoxD Domain-Containing Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSDRHTANRAPLRALTSLVSRVRHGIQWLAHPTLAQFALRLALAVPFWKSGILKWNGFLRLNDTAIDLFTSEFQLHLPGG PYPFPAPAVFAFLSGCGEVLFPVLLALGLGTRFAAAGLFVMTCVVELTVPDGWPIHLTWAAMALGIAAWGPGRLSLDYLL GDRAPRS
Sequences:
>Translated_167_residues MSDRHTANRAPLRALTSLVSRVRHGIQWLAHPTLAQFALRLALAVPFWKSGILKWNGFLRLNDTAIDLFTSEFQLHLPGG PYPFPAPAVFAFLSGCGEVLFPVLLALGLGTRFAAAGLFVMTCVVELTVPDGWPIHLTWAAMALGIAAWGPGRLSLDYLL GDRAPRS >Mature_166_residues SDRHTANRAPLRALTSLVSRVRHGIQWLAHPTLAQFALRLALAVPFWKSGILKWNGFLRLNDTAIDLFTSEFQLHLPGGP YPFPAPAVFAFLSGCGEVLFPVLLALGLGTRFAAAGLFVMTCVVELTVPDGWPIHLTWAAMALGIAAWGPGRLSLDYLLG DRAPRS
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18160; Mature: 18028
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRHTANRAPLRALTSLVSRVRHGIQWLAHPTLAQFALRLALAVPFWKSGILKWNGFLR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCEEECCEEE LNDTAIDLFTSEFQLHLPGGPYPFPAPAVFAFLSGCGEVLFPVLLALGLGTRFAAAGLFV ECCHHEEEEECCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH MTCVVELTVPDGWPIHLTWAAMALGIAAWGPGRLSLDYLLGDRAPRS HHHHHHEECCCCCEEEHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCC >Mature Secondary Structure SDRHTANRAPLRALTSLVSRVRHGIQWLAHPTLAQFALRLALAVPFWKSGILKWNGFLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCEEECCEEE LNDTAIDLFTSEFQLHLPGGPYPFPAPAVFAFLSGCGEVLFPVLLALGLGTRFAAAGLFV ECCHHEEEEECCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH MTCVVELTVPDGWPIHLTWAAMALGIAAWGPGRLSLDYLLGDRAPRS HHHHHHEECCCCCEEEHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA