Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812310

Identifier: 237812310

GI number: 237812310

Start: 2026781

End: 2028958

Strand: Reverse

Name: 237812310

Synonym: GBP346_A2058

Alternate gene names: NA

Gene position: 2028958-2026781 (Counterclockwise)

Preceding gene: 237812311

Following gene: 237812309

Centisome position: 49.5

GC content: 59.18

Gene sequence:

>2178_bases
ATGATAATCCCGGAGAAGGGCGATCCCGTCCGTGGCATTTTCTCACCAGTCGTGGACTGGCCCTTCATCCCGATCCATGC
GATCCTGATGAAGGATGGCCGCATTCTGACCTATGGCAGCACCAAGCAAGGTTTCCAGTCTGGCATGTTTTTCTACGATG
TCTGGTCTCCCTTCCTGGGCGGGAGTCCGAGTGCGCACCAGACATTGCCGAACACGACCCGGGTAGACTTATTTTGCAGC
TCACAACTCAACCTGGCCGACGGCACGGTGGGCATCTTTGGCGGTGACGTCACAGTCGGGAGCAGTGACAGCACCGGCTA
CTCTATCAATGCGTTCACCAATTCGTCCATCACCATATACAATCCGGAGGCGTCGGACGCGAGCCAGCAGTTGGCTAAGC
AAGCCAACCAAATGCTGCTTCCTCGGTGGTACTCCACCGCGACGGTGCTGCCGAACAACGAAATCTATCTGCAGGGCGGG
ACCGGTGGTAATACCTACCCCGAGATCCGAGGTGTCCCGGACGGTGTTCATCGCCTGTTGAACGGAGTCTATACCGGCGT
TTACGACGACTGGTATCCGCGCAACTTCGTTGGCCCGAACGGCAAGATATTTGGCAAGACAGGTGCATCGCTCTTCGAGG
TCGATACCAAGGGGAACGGTTCCGTCCGGACGTTGAACAGCACTGCGCCGTACAACCCGTTCGCCGCCGGTAGCCGGGGT
GAGGCCGTCGTGATGTTCGCACCGGGCAAAATCCTGGTGGTTGGTACGGGCGGCGACGCCCGCACCGCCAGTGTGATCGA
CATCAACAAGATGGAGACATCTGGCTCGGGCGCGTCATCGACACCCAGTGTCATCCCACTCGTAACAGCGACATCGAGAT
TGAATCGCCCCAGAACCTGGGGGCATGCGACTGTCCTGCCGAACGGGCAGGTGTTCGTCAACGGCGGATCGATGGGATAC
AACGAGTTGGCGACCAGCAGCTATACCGCCGAACTGTATGATCCGGCGACGAACACCTGGGCGGACGGCGCGGTTGCTGC
GCATTCGCGTATGTATCACGCAATTTCACTGCTGCTGCCTGATGGGACAGTGCTGACGGGCGGTGGAGGCGCCAGCACCC
CCACCTACCCGGGGCCCGAATTTCCGGTCAATGCGAATGCGGAAGTCTACTATCCGCCTTACCTGTTCAACGCGGACGGC
ACGCGTGCGTCCCGCCCGGTGATCGATTCGGCGCCCGCGGCGATAACCGCCAACCGAATTTTCACGCTCACATCGCCCGA
TGCTGGCTCGATCGGGCGCATGACCATGGTGAAGACCGGATCGACGACCCACTCGTTCAATATGGAGCAACGCTTCGTCG
AACTGAACTTCACCCGGCAAGGAGCGCAGTTGTCCGCGACATTGACCAACGACCGGCACCAGTTTACACCCGGCATGTAC
ATGCTTTTCGTGATCAACGTGAACGGCGTGCCGTCCGTCGCGAGTTTGGTACGCGTCGATCCGGATCCCGTGCTCGCCGC
GACCGCGACGCGGACCCTTCGCATCATGCCCATGGGGGATGCCATCACCTATGGATACATCAATCTGCCGGGGACGAAAT
ACTCAGGTTATCGTGCGCCACTGCAGGACCTGCTCGCACAAGCGAATCTCAACTACCAGTTCGTGGGTTCGATGTATGCG
GGGAACGGTGTCTACGGAATCGACACTCACCACGAAGGCCATCCCGGCATGCTGATCGCCGACATGACGGCAAATGCCGC
AAGCTGGGTGACGGCGGCTAAGCCCGATGTCGTCATGCTGCAAATGGGTTTTACCGACATGCTGAACAATTACCTGGTCG
ATACCGCACCATCGAGGCTCAGAAAGCTGATCGATACGATCCGCGCAGCCGCGCCCGGAGCGAAGATCATTCTGTCGACG
CTCGCACCCACCCCGGATGCGGCGACGCAGGCCCGCATCAACCAGTTCAATGCGCAGGTGGTCAGTCTCGCGAACGACGA
AGCCGCGCAATTCAAGGATGTCTTCCTAGTCGACAGTTCGACGCTGATTCCGAAGGTCGGCGTGGATTACTACGACATGC
TCTATCCCAACGACAACGGTCACACGAAGATCGCGAAAGTATGGCGAGATGGGATTGTGCGTGCGCTGGGATCGCCGTTT
ACGTCCAAGTCGGCATGA

Upstream 100 bases:

>100_bases
GGTGGCCGCGGGACTAACGACTGCGGGCATCGCGACTGCCTCGTTGTTCAAGATGGCAAAGGGCAGTACGGACGGTGGGA
CCCTGTCGCAAAGCGTCGGC

Downstream 100 bases:

>100_bases
GCGTGCGGCGATGGCTCCGTCCATTTCGCCAAGCGTCGTCGGCCCGGATCGGTCATAGGTTCAGCTTTGAATGAGGACAA
CATGAAGAGCGTTACCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Galactose Oxidase; Lipolytic Protein G-D-S-L Family; Ricin B Lectin; Kelch Domain Protein; Glycosyl Hydrolase; Xylanase; Exported Oxidase; FG-GAP Repeat Domain-Containing Protein; SGNH Hydrolase; Kelch Domain-Containing Protein; Endo-1 4-Beta-Xylanase; NHL Repeat Containing Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Kelch Repeat-Containing Protein; Esterase; Endoglucanase; Lipolytic; BKRF1 Encodes EBNA-1 Protein Latent Cycle Gene; Kelch Domain Containing Protein; FG-GAP Repeat Domain Containing Protein; Secreted Beta-Mannosidase; FG-GAP Repeat Protein; Lectin Repeat-Containing Protein; Lipolytic G-D-S-L; FG-GAP Repeat Domain Protein

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MIIPEKGDPVRGIFSPVVDWPFIPIHAILMKDGRILTYGSTKQGFQSGMFFYDVWSPFLGGSPSAHQTLPNTTRVDLFCS
SQLNLADGTVGIFGGDVTVGSSDSTGYSINAFTNSSITIYNPEASDASQQLAKQANQMLLPRWYSTATVLPNNEIYLQGG
TGGNTYPEIRGVPDGVHRLLNGVYTGVYDDWYPRNFVGPNGKIFGKTGASLFEVDTKGNGSVRTLNSTAPYNPFAAGSRG
EAVVMFAPGKILVVGTGGDARTASVIDINKMETSGSGASSTPSVIPLVTATSRLNRPRTWGHATVLPNGQVFVNGGSMGY
NELATSSYTAELYDPATNTWADGAVAAHSRMYHAISLLLPDGTVLTGGGGASTPTYPGPEFPVNANAEVYYPPYLFNADG
TRASRPVIDSAPAAITANRIFTLTSPDAGSIGRMTMVKTGSTTHSFNMEQRFVELNFTRQGAQLSATLTNDRHQFTPGMY
MLFVINVNGVPSVASLVRVDPDPVLAATATRTLRIMPMGDAITYGYINLPGTKYSGYRAPLQDLLAQANLNYQFVGSMYA
GNGVYGIDTHHEGHPGMLIADMTANAASWVTAAKPDVVMLQMGFTDMLNNYLVDTAPSRLRKLIDTIRAAAPGAKIILST
LAPTPDAATQARINQFNAQVVSLANDEAAQFKDVFLVDSSTLIPKVGVDYYDMLYPNDNGHTKIAKVWRDGIVRALGSPF
TSKSA

Sequences:

>Translated_725_residues
MIIPEKGDPVRGIFSPVVDWPFIPIHAILMKDGRILTYGSTKQGFQSGMFFYDVWSPFLGGSPSAHQTLPNTTRVDLFCS
SQLNLADGTVGIFGGDVTVGSSDSTGYSINAFTNSSITIYNPEASDASQQLAKQANQMLLPRWYSTATVLPNNEIYLQGG
TGGNTYPEIRGVPDGVHRLLNGVYTGVYDDWYPRNFVGPNGKIFGKTGASLFEVDTKGNGSVRTLNSTAPYNPFAAGSRG
EAVVMFAPGKILVVGTGGDARTASVIDINKMETSGSGASSTPSVIPLVTATSRLNRPRTWGHATVLPNGQVFVNGGSMGY
NELATSSYTAELYDPATNTWADGAVAAHSRMYHAISLLLPDGTVLTGGGGASTPTYPGPEFPVNANAEVYYPPYLFNADG
TRASRPVIDSAPAAITANRIFTLTSPDAGSIGRMTMVKTGSTTHSFNMEQRFVELNFTRQGAQLSATLTNDRHQFTPGMY
MLFVINVNGVPSVASLVRVDPDPVLAATATRTLRIMPMGDAITYGYINLPGTKYSGYRAPLQDLLAQANLNYQFVGSMYA
GNGVYGIDTHHEGHPGMLIADMTANAASWVTAAKPDVVMLQMGFTDMLNNYLVDTAPSRLRKLIDTIRAAAPGAKIILST
LAPTPDAATQARINQFNAQVVSLANDEAAQFKDVFLVDSSTLIPKVGVDYYDMLYPNDNGHTKIAKVWRDGIVRALGSPF
TSKSA
>Mature_725_residues
MIIPEKGDPVRGIFSPVVDWPFIPIHAILMKDGRILTYGSTKQGFQSGMFFYDVWSPFLGGSPSAHQTLPNTTRVDLFCS
SQLNLADGTVGIFGGDVTVGSSDSTGYSINAFTNSSITIYNPEASDASQQLAKQANQMLLPRWYSTATVLPNNEIYLQGG
TGGNTYPEIRGVPDGVHRLLNGVYTGVYDDWYPRNFVGPNGKIFGKTGASLFEVDTKGNGSVRTLNSTAPYNPFAAGSRG
EAVVMFAPGKILVVGTGGDARTASVIDINKMETSGSGASSTPSVIPLVTATSRLNRPRTWGHATVLPNGQVFVNGGSMGY
NELATSSYTAELYDPATNTWADGAVAAHSRMYHAISLLLPDGTVLTGGGGASTPTYPGPEFPVNANAEVYYPPYLFNADG
TRASRPVIDSAPAAITANRIFTLTSPDAGSIGRMTMVKTGSTTHSFNMEQRFVELNFTRQGAQLSATLTNDRHQFTPGMY
MLFVINVNGVPSVASLVRVDPDPVLAATATRTLRIMPMGDAITYGYINLPGTKYSGYRAPLQDLLAQANLNYQFVGSMYA
GNGVYGIDTHHEGHPGMLIADMTANAASWVTAAKPDVVMLQMGFTDMLNNYLVDTAPSRLRKLIDTIRAAAPGAKIILST
LAPTPDAATQARINQFNAQVVSLANDEAAQFKDVFLVDSSTLIPKVGVDYYDMLYPNDNGHTKIAKVWRDGIVRALGSPF
TSKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77465; Mature: 77465

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPEKGDPVRGIFSPVVDWPFIPIHAILMKDGRILTYGSTKQGFQSGMFFYDVWSPFLG
CCCCCCCCCCHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHCCCEEEEHHHHHHC
GSPSAHQTLPNTTRVDLFCSSQLNLADGTVGIFGGDVTVGSSDSTGYSINAFTNSSITIY
CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECEEEECCCCCCCEEEEEEECCEEEEE
NPEASDASQQLAKQANQMLLPRWYSTATVLPNNEIYLQGGTGGNTYPEIRGVPDGVHRLL
CCCCCCHHHHHHHHHHHEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
NGVYTGVYDDWYPRNFVGPNGKIFGKTGASLFEVDTKGNGSVRTLNSTAPYNPFAAGSRG
HHHCCCCCCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCC
EAVVMFAPGKILVVGTGGDARTASVIDINKMETSGSGASSTPSVIPLVTATSRLNRPRTW
CEEEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHCCCCCCC
GHATVLPNGQVFVNGGSMGYNELATSSYTAELYDPATNTWADGAVAAHSRMYHAISLLLP
CEEEECCCCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEEEEEC
DGTVLTGGGGASTPTYPGPEFPVNANAEVYYPPYLFNADGTRASRPVIDSAPAAITANRI
CCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCEEEECEE
FTLTSPDAGSIGRMTMVKTGSTTHSFNMEQRFVELNFTRQGAQLSATLTNDRHQFTPGMY
EEEECCCCCCCCCEEEEECCCCCEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCEE
MLFVINVNGVPSVASLVRVDPDPVLAATATRTLRIMPMGDAITYGYINLPGTKYSGYRAP
EEEEEECCCCCCHHHHEEECCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC
LQDLLAQANLNYQFVGSMYAGNGVYGIDTHHEGHPGMLIADMTANAASWVTAAKPDVVML
HHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCCCHHEEEECCCCEEEE
QMGFTDMLNNYLVDTAPSRLRKLIDTIRAAAPGAKIILSTLAPTPDAATQARINQFNAQV
ECCCHHHHHHHEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEE
VSLANDEAAQFKDVFLVDSSTLIPKVGVDYYDMLYPNDNGHTKIAKVWRDGIVRALGSPF
EEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
TSKSA
CCCCC
>Mature Secondary Structure
MIIPEKGDPVRGIFSPVVDWPFIPIHAILMKDGRILTYGSTKQGFQSGMFFYDVWSPFLG
CCCCCCCCCCHHHHHHHHCCCCHHEEEEEECCCEEEEECCCHHHHHCCCEEEEHHHHHHC
GSPSAHQTLPNTTRVDLFCSSQLNLADGTVGIFGGDVTVGSSDSTGYSINAFTNSSITIY
CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECEEEECCCCCCCEEEEEEECCEEEEE
NPEASDASQQLAKQANQMLLPRWYSTATVLPNNEIYLQGGTGGNTYPEIRGVPDGVHRLL
CCCCCCHHHHHHHHHHHEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
NGVYTGVYDDWYPRNFVGPNGKIFGKTGASLFEVDTKGNGSVRTLNSTAPYNPFAAGSRG
HHHCCCCCCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCC
EAVVMFAPGKILVVGTGGDARTASVIDINKMETSGSGASSTPSVIPLVTATSRLNRPRTW
CEEEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHCCCCCCC
GHATVLPNGQVFVNGGSMGYNELATSSYTAELYDPATNTWADGAVAAHSRMYHAISLLLP
CEEEECCCCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEEEEEC
DGTVLTGGGGASTPTYPGPEFPVNANAEVYYPPYLFNADGTRASRPVIDSAPAAITANRI
CCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCEEEECEE
FTLTSPDAGSIGRMTMVKTGSTTHSFNMEQRFVELNFTRQGAQLSATLTNDRHQFTPGMY
EEEECCCCCCCCCEEEEECCCCCEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCEE
MLFVINVNGVPSVASLVRVDPDPVLAATATRTLRIMPMGDAITYGYINLPGTKYSGYRAP
EEEEEECCCCCCHHHHEEECCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC
LQDLLAQANLNYQFVGSMYAGNGVYGIDTHHEGHPGMLIADMTANAASWVTAAKPDVVML
HHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEECCCCCHHEEEECCCCEEEE
QMGFTDMLNNYLVDTAPSRLRKLIDTIRAAAPGAKIILSTLAPTPDAATQARINQFNAQV
ECCCHHHHHHHEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEE
VSLANDEAAQFKDVFLVDSSTLIPKVGVDYYDMLYPNDNGHTKIAKVWRDGIVRALGSPF
EEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
TSKSA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA