Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812305

Identifier: 237812305

GI number: 237812305

Start: 2020490

End: 2022211

Strand: Direct

Name: 237812305

Synonym: GBP346_A2053

Alternate gene names: NA

Gene position: 2020490-2022211 (Clockwise)

Preceding gene: 237812304

Following gene: 237812306

Centisome position: 49.3

GC content: 65.51

Gene sequence:

>1722_bases
GTGTACATACTAGGCATCAACGCTGCATATCATGAGTCCGCCGCCTGCCTCGTCAAGGACGGCCAGGTGGTGATGGCGAT
CGAGGAAGAGCGCCTGAACCGGATCAAGCACGGCAAGCTCTCGACGCCGGAGACGACCGGCCAGTTGCCGTGGAAGGCGA
TCCGCAAGTGTCTCGACGCGGCGGGCATCGGCCTCGACGCGTGCGCGCACATCGGCTACTCGTTCAGCCCGGACATCCTG
CAGAAGGGCGTCGCGTCGTGGCGCTCGGCGAACGGCGGCGCGCACGCATGGCCGCTCGACAAGGAAAGCTATCAGACGCT
CGAGGGCGGGCTGAATTTCGCCGAAGGCGTGCTGTCGTCGCGACGGCAGTTGATCGAGGACGCGGGCTTCGCCGGCGAAT
TCCATTTCCTGCCGCACCACGACTGCCACGCGGCGAGCGCGTTCCACGTGTCGCCGTTCGAGAAGGCGGCCGTGCTCGTG
GTCGACGGCATCGGCGAATGGGCGAGCACGTCGCTCTATCACGGCGACGGCACGACGCTCAGGAAGGTGCACGATTTCCT
GTTCCCGAACTCGCTCGGCTTCGTGTGGGAGAAGCTGTCGAAGTATCTCGGCTTCAGCCAGTACGACGCGTCCAAAGTGA
TGGGGCTCGCCGCCTACGGCGACGGCGCGAAGACCATCGAGCTGTTCTCGCGGATCGTCACCGACAAGGAGAACATGAGC
GTCGATCTCGCGGTGCTGCGCCACGAATCGCCCGATTTCACGACGCTCGAAGCGCTGTTCGGGCTGCCGCGCCGGCACAC
GCCCGTCGATTTCGACACCGACAACTGGCAGGCGTACGTCGACGTCGCCGCGGGGCTGCAACTGCTCACCGAGCAGGTTC
TGCTGCACATCCTGCGCAAGTTCGATCGCACGACCTACCGGCACCTGTGCATGGCGGGCGGCGTCGCGCTGAACTGCGCG
GCGAACGGTGTGATCGTGCGCGAGAAGCTGTTCGACGACGTGTTCATCCAGCCGGCGTCGAACGACGCGGGCACCGCGAT
GGGCGCGGCGTTCCTGATCTGGAATCAGGTGCTCGGCCATCCGCGCGAATACGTGTTCAATCACGCCTATCTCGGCCCCG
AGTATTCGGACGGCGAGATCGAGGCGGTGCTGCGGCGCACGAACCTCGCGTACCGGAAAGTCGACATCGAGAAGGAAGTC
GCGCAACTGATCGCGAACGGCAGCATCGTCGGCTGGTTCAACGGGCGGATGGAGTGGGGCCCGCGCGCGCTCGGCGGCCG
CAGCCTGCTCGCGGACCCGCGCAACAAGGCGGTGCGCGAGCTGATGAACGTGAAGGTCAAGCACCGCGAGCTGTATCGCC
CGTTCTGCCCGAGCATCCTCGGCGAGCGCGCGGAAGAGTGGTTCGAGGGCAGCGCGAGCGTCGCGGCCGGCAAGTACATG
TTGACGACCTCGCGCGTGCGCGCGGAGAAAGCCGAGCGGATTCCGGCCGTCGTGCACTTCGACGGCACCGTGCGGGCGCA
GACGGTGTACGCGCAGGACAATCCGCGCTACCACCGGCTGATCTCCGAGTTCGACGCGCTGACGGGCGTGCCGCTGCTGC
TGAACACCTCGTTCAACGATTCGGAGCCGATCGTGTGCACGCCGCAGGATGCGATCAACACGTTCATGAAGACCGACATC
GACTATCTGGCGCTCGGCAGCTACCTGATCTCCAAGCATTGA

Upstream 100 bases:

>100_bases
GCGTGCCTGACGCGAATGACGGCGCGTTCCGGCTTGCCGCCGGCCGGAACGCGCGCACATCGAGAAGCGGACCATCGAGA
CAATCAGAAAGGACGTCACC

Downstream 100 bases:

>100_bases
GCGGCGCCCGAGCGCCCGCCGCCGCCCGCCGCCTGCCTCGGAGCGCCGCGTGCCGCCGCGCTCCGGAGGCGGGCGGCGCG
GCGCCAACCCGTCTCCCCGT

Product: carbamoyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MYILGINAAYHESAACLVKDGQVVMAIEEERLNRIKHGKLSTPETTGQLPWKAIRKCLDAAGIGLDACAHIGYSFSPDIL
QKGVASWRSANGGAHAWPLDKESYQTLEGGLNFAEGVLSSRRQLIEDAGFAGEFHFLPHHDCHAASAFHVSPFEKAAVLV
VDGIGEWASTSLYHGDGTTLRKVHDFLFPNSLGFVWEKLSKYLGFSQYDASKVMGLAAYGDGAKTIELFSRIVTDKENMS
VDLAVLRHESPDFTTLEALFGLPRRHTPVDFDTDNWQAYVDVAAGLQLLTEQVLLHILRKFDRTTYRHLCMAGGVALNCA
ANGVIVREKLFDDVFIQPASNDAGTAMGAAFLIWNQVLGHPREYVFNHAYLGPEYSDGEIEAVLRRTNLAYRKVDIEKEV
AQLIANGSIVGWFNGRMEWGPRALGGRSLLADPRNKAVRELMNVKVKHRELYRPFCPSILGERAEEWFEGSASVAAGKYM
LTTSRVRAEKAERIPAVVHFDGTVRAQTVYAQDNPRYHRLISEFDALTGVPLLLNTSFNDSEPIVCTPQDAINTFMKTDI
DYLALGSYLISKH

Sequences:

>Translated_573_residues
MYILGINAAYHESAACLVKDGQVVMAIEEERLNRIKHGKLSTPETTGQLPWKAIRKCLDAAGIGLDACAHIGYSFSPDIL
QKGVASWRSANGGAHAWPLDKESYQTLEGGLNFAEGVLSSRRQLIEDAGFAGEFHFLPHHDCHAASAFHVSPFEKAAVLV
VDGIGEWASTSLYHGDGTTLRKVHDFLFPNSLGFVWEKLSKYLGFSQYDASKVMGLAAYGDGAKTIELFSRIVTDKENMS
VDLAVLRHESPDFTTLEALFGLPRRHTPVDFDTDNWQAYVDVAAGLQLLTEQVLLHILRKFDRTTYRHLCMAGGVALNCA
ANGVIVREKLFDDVFIQPASNDAGTAMGAAFLIWNQVLGHPREYVFNHAYLGPEYSDGEIEAVLRRTNLAYRKVDIEKEV
AQLIANGSIVGWFNGRMEWGPRALGGRSLLADPRNKAVRELMNVKVKHRELYRPFCPSILGERAEEWFEGSASVAAGKYM
LTTSRVRAEKAERIPAVVHFDGTVRAQTVYAQDNPRYHRLISEFDALTGVPLLLNTSFNDSEPIVCTPQDAINTFMKTDI
DYLALGSYLISKH
>Mature_573_residues
MYILGINAAYHESAACLVKDGQVVMAIEEERLNRIKHGKLSTPETTGQLPWKAIRKCLDAAGIGLDACAHIGYSFSPDIL
QKGVASWRSANGGAHAWPLDKESYQTLEGGLNFAEGVLSSRRQLIEDAGFAGEFHFLPHHDCHAASAFHVSPFEKAAVLV
VDGIGEWASTSLYHGDGTTLRKVHDFLFPNSLGFVWEKLSKYLGFSQYDASKVMGLAAYGDGAKTIELFSRIVTDKENMS
VDLAVLRHESPDFTTLEALFGLPRRHTPVDFDTDNWQAYVDVAAGLQLLTEQVLLHILRKFDRTTYRHLCMAGGVALNCA
ANGVIVREKLFDDVFIQPASNDAGTAMGAAFLIWNQVLGHPREYVFNHAYLGPEYSDGEIEAVLRRTNLAYRKVDIEKEV
AQLIANGSIVGWFNGRMEWGPRALGGRSLLADPRNKAVRELMNVKVKHRELYRPFCPSILGERAEEWFEGSASVAAGKYM
LTTSRVRAEKAERIPAVVHFDGTVRAQTVYAQDNPRYHRLISEFDALTGVPLLLNTSFNDSEPIVCTPQDAINTFMKTDI
DYLALGSYLISKH

Specific function: Unknown

COG id: COG2192

COG function: function code O; Predicted carbamoyl transferase, NodU family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NodU/CmcH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003696 [H]

Pfam domain/function: PF02543 CmcH_NodU [H]

EC number: NA

Molecular weight: Translated: 63542; Mature: 63542

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYILGINAAYHESAACLVKDGQVVMAIEEERLNRIKHGKLSTPETTGQLPWKAIRKCLDA
CEEEECCHHHCCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AGIGLDACAHIGYSFSPDILQKGVASWRSANGGAHAWPLDKESYQTLEGGLNFAEGVLSS
CCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
RRQLIEDAGFAGEFHFLPHHDCHAASAFHVSPFEKAAVLVVDGIGEWASTSLYHGDGTTL
HHHHHHHCCCCCEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCCHHCCCEEECCCCHH
RKVHDFLFPNSLGFVWEKLSKYLGFSQYDASKVMGLAAYGDGAKTIELFSRIVTDKENMS
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHCCCCCCE
VDLAVLRHESPDFTTLEALFGLPRRHTPVDFDTDNWQAYVDVAAGLQLLTEQVLLHILRK
EEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FDRTTYRHLCMAGGVALNCAANGVIVREKLFDDVFIQPASNDAGTAMGAAFLIWNQVLGH
HHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCC
PREYVFNHAYLGPEYSDGEIEAVLRRTNLAYRKVDIEKEVAQLIANGSIVGWFNGRMEWG
CHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHEEECHHHHHHHHHHCCCEEEEECCCCCCC
PRALGGRSLLADPRNKAVRELMNVKVKHRELYRPFCPSILGERAEEWFEGSASVAAGKYM
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEE
LTTSRVRAEKAERIPAVVHFDGTVRAQTVYAQDNPRYHRLISEFDALTGVPLLLNTSFND
EEHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCC
SEPIVCTPQDAINTFMKTDIDYLALGSYLISKH
CCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYILGINAAYHESAACLVKDGQVVMAIEEERLNRIKHGKLSTPETTGQLPWKAIRKCLDA
CEEEECCHHHCCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AGIGLDACAHIGYSFSPDILQKGVASWRSANGGAHAWPLDKESYQTLEGGLNFAEGVLSS
CCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
RRQLIEDAGFAGEFHFLPHHDCHAASAFHVSPFEKAAVLVVDGIGEWASTSLYHGDGTTL
HHHHHHHCCCCCEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCCHHCCCEEECCCCHH
RKVHDFLFPNSLGFVWEKLSKYLGFSQYDASKVMGLAAYGDGAKTIELFSRIVTDKENMS
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHCCCCCCE
VDLAVLRHESPDFTTLEALFGLPRRHTPVDFDTDNWQAYVDVAAGLQLLTEQVLLHILRK
EEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FDRTTYRHLCMAGGVALNCAANGVIVREKLFDDVFIQPASNDAGTAMGAAFLIWNQVLGH
HHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCC
PREYVFNHAYLGPEYSDGEIEAVLRRTNLAYRKVDIEKEVAQLIANGSIVGWFNGRMEWG
CHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHEEECHHHHHHHHHHCCCEEEEECCCCCCC
PRALGGRSLLADPRNKAVRELMNVKVKHRELYRPFCPSILGERAEEWFEGSASVAAGKYM
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEE
LTTSRVRAEKAERIPAVVHFDGTVRAQTVYAQDNPRYHRLISEFDALTGVPLLLNTSFND
EEHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCC
SEPIVCTPQDAINTFMKTDIDYLALGSYLISKH
CCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]