Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812197

Identifier: 237812197

GI number: 237812197

Start: 1883238

End: 1883948

Strand: Reverse

Name: 237812197

Synonym: GBP346_A1943

Alternate gene names: NA

Gene position: 1883948-1883238 (Counterclockwise)

Preceding gene: 237812198

Following gene: 237812196

Centisome position: 45.97

GC content: 66.24

Gene sequence:

>711_bases
ATGGTGCCAGCCCGCCATTGTCATGTCGCGGTATTCGATCAGGCGATCGTCGCGCTCGATATACGACGGTCGCGCTATTT
TCTTTATGACGCAGCGTGCGCGAGGGATTTCGCCGATCATTATCTGGATTTCAAGCCGATCGACGCGCCGCGCGCATTGA
AACCGCTGATCGCCGACCGAATCCTCGTCGCCGAATCGCCAGCGGCCGCGCGAAGCCGCATCGCCGATTACCGCGGCTGG
AGCTTCGACGCATTCGATTCCGGCATCTGGGGCAGCCGGGTGCTCGGCAAGCGCGATGCCGCCCGCTTCGAATGGCTGCC
GTTCTGGCGCATCGTGCGCAGCGCGGCATCGCTCAAGATGCGCGGCTTTCACGCGCTCGCGGCGCTCGATCGGCTCGACG
CCCGCGGCGCGCCGGCGTGCGGCGACGACGCGTCGCGCACGGTCGAGCGCTTGCTGCGCGCGTCGATCTGGTCGCCCTTT
CGCATCACGTGCGTGCAAATGTCGCTCGCGCTCGCCACGCATCTGCGGCGGCAGAACGTGCCCGCCCAACTCGTGATCGG
CGTGAGGCCGATGCCGTTCGTCGCCCATGCATGGGTCGAAGTCGACGGGCGCGTGTGCGGCGACGAACCGGACCTGAAAA
AGAGCTATGGCGAAATCTATCGAACGCCTCGATGCGACGCATCCGCCGCCCCGTTCGGGCTGGCGGCTTGA

Upstream 100 bases:

>100_bases
TTCCAAACCCCGGACGCACGCGTCATTTCGCGCTTCGGGTTCAATTAATTAGCCTCTCTTGAAGCGGGTGGGGCATTTTG
CCCCACCGCAATAAATAACC

Downstream 100 bases:

>100_bases
ACGGCGCGCTTGGACGGATGCGGCCGCGCATCGCGGCCTGCTGTCCCGCGCGGCCGGCCCCGATCGGCCGATCGGCGTGA
CGCTGCTCGAAGCGGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW
SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPACGDDASRTVERLLRASIWSPF
RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA

Sequences:

>Translated_236_residues
MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW
SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPACGDDASRTVERLLRASIWSPF
RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA
>Mature_236_residues
MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW
SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPACGDDASRTVERLLRASIWSPF
RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26340; Mature: 26340

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADR
CCCCCHHHHHHHHHHHHHEEHHCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ILVAESPAAARSRIADYRGWSFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKM
HHEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RGFHALAALDRLDARGAPACGDDASRTVERLLRASIWSPFRITCVQMSLALATHLRRQNV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA
CEEEEECCCCCCHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADR
CCCCCHHHHHHHHHHHHHEEHHCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ILVAESPAAARSRIADYRGWSFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKM
HHEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RGFHALAALDRLDARGAPACGDDASRTVERLLRASIWSPFRITCVQMSLALATHLRRQNV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA
CEEEEECCCCCCHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA