| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812196
Identifier: 237812196
GI number: 237812196
Start: 1881560
End: 1883161
Strand: Reverse
Name: 237812196
Synonym: GBP346_A1942
Alternate gene names: NA
Gene position: 1883161-1881560 (Counterclockwise)
Preceding gene: 237812197
Following gene: 237812195
Centisome position: 45.95
GC content: 70.79
Gene sequence:
>1602_bases GTGACGCTGCTCGAAGCGGGCGGCCGCGGCCGCGCCTATCTGCGCGAGGCGCCGGCGAGCGTCGATCGCGCGCTCGCGCG CGCACGCACGCTGGCCGACGCGCGCGACGCCGTCACGCGCGCCGTCTGGGGCGCCTACGTCGCCGTGCTCGACGAAGCCG CCACCGGCCGCCGGCTGTTCCTGCCCGATCCGCTGCATTCGGTGCGGCTCTATTACCGGACGGACGAGGACGGCCGCGTC GACGTCGATCCGCAGGCGGCGAACCTGCTTCGCGGCGCGTCGATCGACTGGAACCTCGACTACCTGATCGAATTCGCGTG CACGCAGTTCGGTCCGCTCGGCGAAACGCCGTTCGCCTCGGTTCGCGCGGTGCCGCCGGGCTGCGCGCTCGTCGTCGACG CCGACGGGCGGTGCGCGATCGAGCGCGCGTGGCTGCCGCGCGCGAGCGCCGGCGACGATGTCCGCGCGTCGTGCGCGGCG GCGCTCGACGAGGTCTATTCGCGCTTCGCGCGCAGCCATCCGAACGTGTGCGCCGCGCTGTCGGGCGGCGTCGATTCGTC CGCCGGCGCGATCCTCCTGCGCAAGGCGCTCGGCGCGCAGGCGCCGCTCGCCGCCGTCCATCTGTTCTCCCCCTCGTCGC CCGACTGCTACGAGCGCGACCTCGCGGCGCGCGTCGCCGATTCGATCGGCGCGCGGCTCATCTGCATCGACATCGATCGC CATTTGCCGTTCTCCGAACGAATCGTGCCAACCCCGCCCGCCACGCTGAGCCAGGACATGCTGTTTCTCGGCATCGACCG GGCGGTGTCGCGCGCGATCGGCGCGTCGTCGGTACTGCTCGAGGGCCAGGGCGGCGATCTGCTGTTCAAGGCGGTGCCCG ACGCGAACGCGGTGCTCGACGCGCTGCGCGGCAAGGGTTGGGCGTTCGCGCTGCGCACGGCGGAGAAGCTCGCGGTGCTT CACAACGATTCGATCCCGCGGGTGCTGCTGATGGCCGCGAAGATCGCGCTGCGAAGGCGGCTGTTCGGACAGGATGCCGC GGGAACGCGGCAGACGATGTCGAAGCTGTTCGCGTCGCACGCGCCGCGCGCGGCGGCCTCGCCCACGCGCATGCGTCGCG CGGACGCGCCGCTCGACGAATCGGTCGCGATGCTCGACCGGTTCGTGTCGATCATGACGCCCGTCACCGACGCCGCGTAC ACGAACCGGCTCAATCCGTATCTCGCGCAGCCGGTCGTCGAGGCGAGCTTCGGCCTGCGCAGCTACGACAGCTTCGATCA TCGCAACGACCGGATCGTGCTGCGCGAGATCGCGGCCGCGCACACCCCTGTCGACGTGCTGTGGCGCCGGACCAAGGGAT CGTTCGGCATCGGCTTCGTGAAAGGCATCGTGTCGCACTACGACGCGTTTCGCGAGCTGATCCGCGACGGCGTGCTGATG CGCAGCGGCCAGCTCGACGAGGCCGAGCTCGAGCACGCGCTCAAGGCGGTGCGCGTCGGACAGAACGCGGCCGCGATCAG CCTCGCGCTCGTCGGATGCGTGGAGATCTTTTGCGCGTCCTGGCAGAATTTCATGACGAACCGTTCCGCTGCGATATGCT GA
Upstream 100 bases:
>100_bases GCCCCGTTCGGGCTGGCGGCTTGAACGGCGCGCTTGGACGGATGCGGCCGCGCATCGCGGCCTGCTGTCCCGCGCGGCCG GCCCCGATCGGCCGATCGGC
Downstream 100 bases:
>100_bases CGAACCCTATGCTGACGAACCGTTTCGCCGCGCGCGCGCCCATGCGCGCGCGCCCGCATCCGGCCCCGCCGCGCGCGGGC GCCGGGCTTTCCTCCTGTGC
Product: asparagine synthase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MTLLEAGGRGRAYLREAPASVDRALARARTLADARDAVTRAVWGAYVAVLDEAATGRRLFLPDPLHSVRLYYRTDEDGRV DVDPQAANLLRGASIDWNLDYLIEFACTQFGPLGETPFASVRAVPPGCALVVDADGRCAIERAWLPRASAGDDVRASCAA ALDEVYSRFARSHPNVCAALSGGVDSSAGAILLRKALGAQAPLAAVHLFSPSSPDCYERDLAARVADSIGARLICIDIDR HLPFSERIVPTPPATLSQDMLFLGIDRAVSRAIGASSVLLEGQGGDLLFKAVPDANAVLDALRGKGWAFALRTAEKLAVL HNDSIPRVLLMAAKIALRRRLFGQDAAGTRQTMSKLFASHAPRAAASPTRMRRADAPLDESVAMLDRFVSIMTPVTDAAY TNRLNPYLAQPVVEASFGLRSYDSFDHRNDRIVLREIAAAHTPVDVLWRRTKGSFGIGFVKGIVSHYDAFRELIRDGVLM RSGQLDEAELEHALKAVRVGQNAAAISLALVGCVEIFCASWQNFMTNRSAAIC
Sequences:
>Translated_533_residues MTLLEAGGRGRAYLREAPASVDRALARARTLADARDAVTRAVWGAYVAVLDEAATGRRLFLPDPLHSVRLYYRTDEDGRV DVDPQAANLLRGASIDWNLDYLIEFACTQFGPLGETPFASVRAVPPGCALVVDADGRCAIERAWLPRASAGDDVRASCAA ALDEVYSRFARSHPNVCAALSGGVDSSAGAILLRKALGAQAPLAAVHLFSPSSPDCYERDLAARVADSIGARLICIDIDR HLPFSERIVPTPPATLSQDMLFLGIDRAVSRAIGASSVLLEGQGGDLLFKAVPDANAVLDALRGKGWAFALRTAEKLAVL HNDSIPRVLLMAAKIALRRRLFGQDAAGTRQTMSKLFASHAPRAAASPTRMRRADAPLDESVAMLDRFVSIMTPVTDAAY TNRLNPYLAQPVVEASFGLRSYDSFDHRNDRIVLREIAAAHTPVDVLWRRTKGSFGIGFVKGIVSHYDAFRELIRDGVLM RSGQLDEAELEHALKAVRVGQNAAAISLALVGCVEIFCASWQNFMTNRSAAIC >Mature_532_residues TLLEAGGRGRAYLREAPASVDRALARARTLADARDAVTRAVWGAYVAVLDEAATGRRLFLPDPLHSVRLYYRTDEDGRVD VDPQAANLLRGASIDWNLDYLIEFACTQFGPLGETPFASVRAVPPGCALVVDADGRCAIERAWLPRASAGDDVRASCAAA LDEVYSRFARSHPNVCAALSGGVDSSAGAILLRKALGAQAPLAAVHLFSPSSPDCYERDLAARVADSIGARLICIDIDRH LPFSERIVPTPPATLSQDMLFLGIDRAVSRAIGASSVLLEGQGGDLLFKAVPDANAVLDALRGKGWAFALRTAEKLAVLH NDSIPRVLLMAAKIALRRRLFGQDAAGTRQTMSKLFASHAPRAAASPTRMRRADAPLDESVAMLDRFVSIMTPVTDAAYT NRLNPYLAQPVVEASFGLRSYDSFDHRNDRIVLREIAAAHTPVDVLWRRTKGSFGIGFVKGIVSHYDAFRELIRDGVLMR SGQLDEAELEHALKAVRVGQNAAAISLALVGCVEIFCASWQNFMTNRSAAIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57503; Mature: 57372
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLEAGGRGRAYLREAPASVDRALARARTLADARDAVTRAVWGAYVAVLDEAATGRRLF CCEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LPDPLHSVRLYYRTDEDGRVDVDPQAANLLRGASIDWNLDYLIEFACTQFGPLGETPFAS CCCCCCCEEEEEEECCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC VRAVPPGCALVVDADGRCAIERAWLPRASAGDDVRASCAAALDEVYSRFARSHPNVCAAL EEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE SGGVDSSAGAILLRKALGAQAPLAAVHLFSPSSPDCYERDLAARVADSIGARLICIDIDR CCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCC HLPFSERIVPTPPATLSQDMLFLGIDRAVSRAIGASSVLLEGQGGDLLFKAVPDANAVLD CCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHH ALRGKGWAFALRTAEKLAVLHNDSIPRVLLMAAKIALRRRLFGQDAAGTRQTMSKLFASH HHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC APRAAASPTRMRRADAPLDESVAMLDRFVSIMTPVTDAAYTNRLNPYLAQPVVEASFGLR CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC SYDSFDHRNDRIVLREIAAAHTPVDVLWRRTKGSFGIGFVKGIVSHYDAFRELIRDGVLM CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE RSGQLDEAELEHALKAVRVGQNAAAISLALVGCVEIFCASWQNFMTNRSAAIC CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLLEAGGRGRAYLREAPASVDRALARARTLADARDAVTRAVWGAYVAVLDEAATGRRLF CEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LPDPLHSVRLYYRTDEDGRVDVDPQAANLLRGASIDWNLDYLIEFACTQFGPLGETPFAS CCCCCCCEEEEEEECCCCCEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC VRAVPPGCALVVDADGRCAIERAWLPRASAGDDVRASCAAALDEVYSRFARSHPNVCAAL EEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE SGGVDSSAGAILLRKALGAQAPLAAVHLFSPSSPDCYERDLAARVADSIGARLICIDIDR CCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCC HLPFSERIVPTPPATLSQDMLFLGIDRAVSRAIGASSVLLEGQGGDLLFKAVPDANAVLD CCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHH ALRGKGWAFALRTAEKLAVLHNDSIPRVLLMAAKIALRRRLFGQDAAGTRQTMSKLFASH HHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC APRAAASPTRMRRADAPLDESVAMLDRFVSIMTPVTDAAYTNRLNPYLAQPVVEASFGLR CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCC SYDSFDHRNDRIVLREIAAAHTPVDVLWRRTKGSFGIGFVKGIVSHYDAFRELIRDGVLM CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE RSGQLDEAELEHALKAVRVGQNAAAISLALVGCVEIFCASWQNFMTNRSAAIC CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA