| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cysW [H]
Identifier: 237812140
GI number: 237812140
Start: 1825700
End: 1826734
Strand: Direct
Name: cysW [H]
Synonym: GBP346_A1886
Alternate gene names: 237812140
Gene position: 1825700-1826734 (Clockwise)
Preceding gene: 237812139
Following gene: 237812141
Centisome position: 44.54
GC content: 70.05
Gene sequence:
>1035_bases ATGAGCCGCGATACCGCTCGATCCCGCGCGGGCGCCGCGCGCGCCGACGCTGGCCCGGAATTCGGCGCTCGATTCGGCCT TGAATCCGGCCTTGAATCCGGCGATGACGCGCGCCGCGCCGCGCGCGCCCCGGCGCGAGCGCGCCGGCTCGACCCCGTGA GCGAGCCGCGCGCGGTGCGCTGGCTGCTCACGGGCGCGGCGCTCGCGTTCCTCGCGCTCTTTCTCGTCGTGCCGCTTGCC GCGGTGTTCTTCGAGGCGCTGCGCAAGGGCGTCGATTTCTATCTCGAATCGCTCGCCGATCCGGACGCGTGGTCGGCGAT CAAGCTCACGCTCGTCGTCGCCGCGATCGCCGTGCCGCTCAATCTCGTATTCGGCGTGTGCGCGTCGTGGGCGATCGCGA AGTTCGAGTTCAAGGGCAAGGCGGTGCTGACGACGCTCATCGATCTGCCGTTCTCGGTGTCGCCCGTGATCTCGGGCCTC GTCTACGTGCTGCTGTTCGGCGCGCAGGGCTGGCTCGGCCCGTGGCTGCAGGCGCATGACGTGCAGATCATCTTCGCCGT GCCGGGCATCGTGCTCGCGACGATCTTCGTCACGTTCCCGTTCGTCGCGCGCGAGCTGATTCCGCTGATGCAGGCGCAGG GCGCCGACGAGGAGGAGGCCGCGCGCGTGCTCGGCGCATCCGGCTGGCAGATCTTCCGGCGCGTCACGCTGCCGAACGTG AAGTGGGGCCTGCTGTACGGCGTGATTCTCTGCAACGCGCGCGCAATGGGCGAGTTCGGCGCGGTGTCGGTGGTGTCGGG CCATATCCGCGGGCAGACCGACACGATGCCGCTGCACGTCGAGATTCTCTACAACGAGTACAACTTCGCGGCCGCGTTCG CGGTGGCGTCGGTACTCGCGCTGCTCGCGCTCGTCACGCTCGCGCTCAAGCTGTTCGCCGAGCGGCGGCTGTCCGCCGAA CTCGCGCACGGGCGCGACGACGCGAGCGCCCCCGCCGCGCACCCGGGCGCCGCCGTCACTTCGTCGATTTCGTAA
Upstream 100 bases:
>100_bases TCATCAACACGCTGCAGTGGTATCTGCAGCGCCGCACGAGCCGCGGCGCGAGCGGCCCGACGCCGGCCGCGCATGCGGCG ACGGCCCTCGGAGGCGCGCA
Downstream 100 bases:
>100_bases AGAGGCAAACCAGATGGGCATCACCGTTCGTAATCTGCACAAACGCTTCGGCGAGTTCGCCGCGCTCGACGACGTCTCGC TCGATTTCCCGGCGGGTGAG
Product: sulfate ABC transporter, permease protein CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSRDTARSRAGAARADAGPEFGARFGLESGLESGDDARRAARAPARARRLDPVSEPRAVRWLLTGAALAFLALFLVVPLA AVFFEALRKGVDFYLESLADPDAWSAIKLTLVVAAIAVPLNLVFGVCASWAIAKFEFKGKAVLTTLIDLPFSVSPVISGL VYVLLFGAQGWLGPWLQAHDVQIIFAVPGIVLATIFVTFPFVARELIPLMQAQGADEEEAARVLGASGWQIFRRVTLPNV KWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTDTMPLHVEILYNEYNFAAAFAVASVLALLALVTLALKLFAERRLSAE LAHGRDDASAPAAHPGAAVTSSIS
Sequences:
>Translated_344_residues MSRDTARSRAGAARADAGPEFGARFGLESGLESGDDARRAARAPARARRLDPVSEPRAVRWLLTGAALAFLALFLVVPLA AVFFEALRKGVDFYLESLADPDAWSAIKLTLVVAAIAVPLNLVFGVCASWAIAKFEFKGKAVLTTLIDLPFSVSPVISGL VYVLLFGAQGWLGPWLQAHDVQIIFAVPGIVLATIFVTFPFVARELIPLMQAQGADEEEAARVLGASGWQIFRRVTLPNV KWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTDTMPLHVEILYNEYNFAAAFAVASVLALLALVTLALKLFAERRLSAE LAHGRDDASAPAAHPGAAVTSSIS >Mature_343_residues SRDTARSRAGAARADAGPEFGARFGLESGLESGDDARRAARAPARARRLDPVSEPRAVRWLLTGAALAFLALFLVVPLAA VFFEALRKGVDFYLESLADPDAWSAIKLTLVVAAIAVPLNLVFGVCASWAIAKFEFKGKAVLTTLIDLPFSVSPVISGLV YVLLFGAQGWLGPWLQAHDVQIIFAVPGIVLATIFVTFPFVARELIPLMQAQGADEEEAARVLGASGWQIFRRVTLPNVK WGLLYGVILCNARAMGEFGAVSVVSGHIRGQTDTMPLHVEILYNEYNFAAAFAVASVLALLALVTLALKLFAERRLSAEL AHGRDDASAPAAHPGAAVTSSIS
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=268, Percent_Identity=52.6119402985075, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=36.8932038834951, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1786980, Length=181, Percent_Identity=34.8066298342541, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787369, Length=175, Percent_Identity=28, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 36652; Mature: 36521
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDTARSRAGAARADAGPEFGARFGLESGLESGDDARRAARAPARARRLDPVSEPRAVR CCCCHHHHHCCCCCCCCCCCHHHHHCHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCHHHH WLLTGAALAFLALFLVVPLAAVFFEALRKGVDFYLESLADPDAWSAIKLTLVVAAIAVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NLVFGVCASWAIAKFEFKGKAVLTTLIDLPFSVSPVISGLVYVLLFGAQGWLGPWLQAHD HHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VQIIFAVPGIVLATIFVTFPFVARELIPLMQAQGADEEEAARVLGASGWQIFRRVTLPNV EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC KWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTDTMPLHVEILYNEYNFAAAFAVASVLA HHHHHHHHHHHCCHHCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH LLALVTLALKLFAERRLSAELAHGRDDASAPAAHPGAAVTSSIS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRDTARSRAGAARADAGPEFGARFGLESGLESGDDARRAARAPARARRLDPVSEPRAVR CCCHHHHHCCCCCCCCCCCHHHHHCHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCHHHH WLLTGAALAFLALFLVVPLAAVFFEALRKGVDFYLESLADPDAWSAIKLTLVVAAIAVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NLVFGVCASWAIAKFEFKGKAVLTTLIDLPFSVSPVISGLVYVLLFGAQGWLGPWLQAHD HHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VQIIFAVPGIVLATIFVTFPFVARELIPLMQAQGADEEEAARVLGASGWQIFRRVTLPNV EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC KWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTDTMPLHVEILYNEYNFAAAFAVASVLA HHHHHHHHHHHCCHHCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH LLALVTLALKLFAERRLSAELAHGRDDASAPAAHPGAAVTSSIS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]