| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cysT [H]
Identifier: 237812139
GI number: 237812139
Start: 1824810
End: 1825703
Strand: Direct
Name: cysT [H]
Synonym: GBP346_A1885
Alternate gene names: 237812139
Gene position: 1824810-1825703 (Clockwise)
Preceding gene: 237812138
Following gene: 237812140
Centisome position: 44.52
GC content: 69.24
Gene sequence:
>894_bases ATGACGACGTTCACCTTCCGCAAGCCGAGCGCGCTGCCCGGATTCGGCGTGACGCTCGGCATCACGCTGGCCTATCTGAG CCTCGTGGTGCTGATCCCGCTCGCCGCCACCTTCCTGAAGACGGCCACGCTCACGTGGGACCAGTTCGTCGCCGCGACGA CGTCGCCGCGCGTGCTCGCGTCGTACCGGCTCACGTTTTCGGCCGCGCTCGGCGGCGCGCTCGTGAACGCGGTGTTCGGC TTTCTCGTCGCATGGGTGCTGGTGCGCTACACGTTCCCGCTCAAGCGGCTCGTCGACGCGATCGTCGACCTGCCGTTCGC GCTGCCGACCTCGGTCGCGGGCATCTCGCTCGCGGCCGTCTACGCGCAGAACGGCTGGATCGGCCGCTATCTCGCGCCGC TCGGGATCAAGGTCGCGTTCACGCCGTTCGGCGTGCTCGTCGCGCTGACCTTCATCGGCCTGCCGTTCGTCGTGCGCACC GTGCAGCCCGTTCTCGAGGATTTCGAGCGTGAGCAGGAGGAGGCGGCCGCATGCCTCGGCGCGTCGCGCTGGCTCACGTT CCGCCGCGTCGTGCTGCCGGCCGTGACGCCCGCGCTGCTGACGGGCTTCGCGCTCGCGTTCGCGCGCGCGCTCGGCGAAT ACGGCTCGGTGATCTTCATCGCCGGCAACGTGCCGATGAAATCGGAAATCACGTCGCTGCTCATCATCACGAAGCTCGAG CAGTACGACTACGCGGGCGCCACCGCGCTCGCCGTCGTGATGCTCGTCGTGTCGTTCGTGATGCTGCTCCTCATCAACAC GCTGCAGTGGTATCTGCAGCGCCGCACGAGCCGCGGCGCGAGCGGCCCGACGCCGGCCGCGCATGCGGCGACGGCCCTCG GAGGCGCGCAATGA
Upstream 100 bases:
>100_bases CGGGCTTCGCGACAACACGAAATCGGCACGGCGGACGCGCGTTGCAGCGCGTCCGCCGTGCCGTTGAACCCATGTGCACC ACCCTGGAAGAGCATTCCGC
Downstream 100 bases:
>100_bases GCCGCGATACCGCTCGATCCCGCGCGGGCGCCGCGCGCGCCGACGCTGGCCCGGAATTCGGCGCTCGATTCGGCCTTGAA TCCGGCCTTGAATCCGGCGA
Product: sulfate ABC transporter, permease protein CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTTFTFRKPSALPGFGVTLGITLAYLSLVVLIPLAATFLKTATLTWDQFVAATTSPRVLASYRLTFSAALGGALVNAVFG FLVAWVLVRYTFPLKRLVDAIVDLPFALPTSVAGISLAAVYAQNGWIGRYLAPLGIKVAFTPFGVLVALTFIGLPFVVRT VQPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVTPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATALAVVMLVVSFVMLLLINTLQWYLQRRTSRGASGPTPAAHAATALGGAQ
Sequences:
>Translated_297_residues MTTFTFRKPSALPGFGVTLGITLAYLSLVVLIPLAATFLKTATLTWDQFVAATTSPRVLASYRLTFSAALGGALVNAVFG FLVAWVLVRYTFPLKRLVDAIVDLPFALPTSVAGISLAAVYAQNGWIGRYLAPLGIKVAFTPFGVLVALTFIGLPFVVRT VQPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVTPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATALAVVMLVVSFVMLLLINTLQWYLQRRTSRGASGPTPAAHAATALGGAQ >Mature_296_residues TTFTFRKPSALPGFGVTLGITLAYLSLVVLIPLAATFLKTATLTWDQFVAATTSPRVLASYRLTFSAALGGALVNAVFGF LVAWVLVRYTFPLKRLVDAIVDLPFALPTSVAGISLAAVYAQNGWIGRYLAPLGIKVAFTPFGVLVALTFIGLPFVVRTV QPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVTPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLEQ YDYAGATALAVVMLVVSFVMLLLINTLQWYLQRRTSRGASGPTPAAHAATALGGAQ
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=264, Percent_Identity=50, Blast_Score=250, Evalue=8e-68, Organism=Escherichia coli, GI87082099, Length=262, Percent_Identity=34.3511450381679, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1786980, Length=202, Percent_Identity=34.1584158415842, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786254, Length=227, Percent_Identity=28.6343612334802, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787369, Length=172, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787368, Length=237, Percent_Identity=27.4261603375527, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31737; Mature: 31606
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFTFRKPSALPGFGVTLGITLAYLSLVVLIPLAATFLKTATLTWDQFVAATTSPRVLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHH SYRLTFSAALGGALVNAVFGFLVAWVLVRYTFPLKRLVDAIVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YAQNGWIGRYLAPLGIKVAFTPFGVLVALTFIGLPFVVRTVQPVLEDFEREQEEAAACLG HHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVTPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATALAVVMLVVSFVMLLLINTLQWYLQRRTSRGASGPTPAAHAATALGGAQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TTFTFRKPSALPGFGVTLGITLAYLSLVVLIPLAATFLKTATLTWDQFVAATTSPRVLA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHH SYRLTFSAALGGALVNAVFGFLVAWVLVRYTFPLKRLVDAIVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YAQNGWIGRYLAPLGIKVAFTPFGVLVALTFIGLPFVVRTVQPVLEDFEREQEEAAACLG HHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVTPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATALAVVMLVVSFVMLLLINTLQWYLQRRTSRGASGPTPAAHAATALGGAQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]