| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is lplT [H]
Identifier: 237811994
GI number: 237811994
Start: 1680051
End: 1681985
Strand: Direct
Name: lplT [H]
Synonym: GBP346_A1734
Alternate gene names: 237811994
Gene position: 1680051-1681985 (Clockwise)
Preceding gene: 237811993
Following gene: 237811995
Centisome position: 40.99
GC content: 68.06
Gene sequence:
>1935_bases ATGAGCGATCCTTCCATTACGTCGACCGCGCGGCGCGAGAAGCGCCGCGCCCATCCGTCGCAGTTCGATCTGCTGCGCGA GCGCCGCTTCGCGCCGTTTTTCGCGACGCAGTTCATGGGCGCGCTGAACGACAACGTCTTCAAGATCGGCTTCACCTCGC TCGTCACCTATCAGACGGCGAAATTCAGCGGCGTCGATCCGAAGACGGCCGCGTTCCTGATCTCGGCGATCTTCATCCTG CCGTTCGTGCTGTTCTCGGCGACGGCCGGGCAGCTCGCCGACAAGTACGACAAGGCGCGCCTCACGCGCTTCGTGAAGAG CTTCGAGATCGCGCTGATGGCGGTCGGCGCGGCGGGCTTCGTCACGCACGGCGCGCCGCTGCTGTACCTGTGCACGTTCA TGATGGGCATGCATTCGACGCTGTTCGGCCCCGTCAAGTATTCGTACCTGCCGCAGCATCTGAACGATCATGAGCTCGTC GGCGGCAACGGGCTCGTCGAGATGGGCACGTTCGTCGCGATCCTGATCGGCACGATCGTCGGCGGCGCGGCGGCGGGCAT CTCCGGGCGCGGCGAGCTGCTGCTCGCCGTCTGCTGCGTCGGCATCGCGCTCGTCGGGCGCGTCGCGGCGGCGGGCGTGC CGGCGACGCCCGCACCGCAGCCGAAGCTCGCGATCAACTGGAACCCGTTTTCCGAGACGTGGCGCAACCTGAAGCTCGCG CGCGAGAACCGGACGGTGTTCCTGAGCCTGCTCGGCATTTCGTGGCTGTGGTTCGTCGGCGCGACGTTCCTCACGTCGTT CTTCGGCTTCGCGAAGGACGTGCTGTCGGCGAACCCGGATGTCGTCACCGTGCTGCTCGCGACGTTCTCGTTCGGCATCG GCCTCGGCTCGCTGCTGTGCGAGCGGTTGTCGCGGCGGCGCGTCGAGATCGGGCTCGTGCCGCTCGGCTCGCTCGGCATC AGCGTGTTCGCGATCGAGCTGTACTTCGCGAGCCACGCGCTGCCCACGCAGACGCATCTGCTGACGATCGGCGAGTTTCT CGGCCACGCGGCGCACTGGCGGATCCTCGCCGACCTGTTCCTGCTCGCGATGTTCGGCGGCTTCTACAGCGTGCCGCTTT ATGCGCTGATCCAGAGCCGCAGCGCGCCCACGCACCGCGCGCGGATCATCGCCGCGAACAACATCCTGAACGCGCTCTTC ATGATCGTGTCGGCGCTGATGGCGATGCTGCTCACGAAGGCGGGCGTCAGCATCCCGGGGATCTTCCTCGTGACCGCGCT GCTGAACGTCGTCGTCGCGTCGTACATCTACTCGCTCGTGCCCGAGTTCCTGCTGCGCTTCATCGCATGGGCGCTCGTGC ACACGTTCTACCGGATCCGCCTCGTGCACGCGGAGCGGATTCCGGACGAGGGCGCGGCGCTCCTCGTCTGCAACCACGTG AGCTATGTCGACGCGCTCGTGCTCGCGGCCGCGAGCCCGCGGCCGATCCGCTTCGTGATGGATCACCGGATCTTCAACAC GCGCTTCGCGAGCTGGGCGTTCCGTCACGCGAAGGCGATTCCGATCGCGCCGCGCCACGAGGACCCCGAGATGCTCGCGC GCGCGTACGACGCGTGCGAGGCGGCGCTGCGTGAAGGCGAGCTCGTCTGCATCTTCCCGGAAGGCAAGCTGACGAAGACG GGCGACGTCAACACGTTTCACCACGGCGTCACCGAGATCCTGACGCGCGCGCGCGCGCCCGTCGTGCCGATGGCGTTGCG CGGACTATGGGGCAGCGTGTTTTCGCGGCACGAGGACGCGCGCTGGCCGCGCCCGGTGAAGCGCGGCGTGATGAGCCGCC TGACGCTTGCGGTCGGCGAGCCGATCCCGGCCGCGGCGGCGACGCCGGAGGCGTTGCAGGCCGTCGTCGCCGAGCTGCGC GGCGCGCGCAAGTAG
Upstream 100 bases:
>100_bases AGCCCGCGCGCGGGCCGCCGCGCGCGTTCCGGCCCTTCGTCAATTCTTCTTTCGCCCGGGTGCGCGATCGTGCTGACGCG CCACGCGGGCGCACTCACGC
Downstream 100 bases:
>100_bases GCGGCGCGGGCAGGCAGGCGGTGCGCGGCGCGGTTCCGCCCAGGTTCGTGCGGCGTGGCGCGCGCCGGTAGCGGCTTCGT CGGATGGCGGCGGGCGGCGC
Product: transporter, major facilitator family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MSDPSITSTARREKRRAHPSQFDLLRERRFAPFFATQFMGALNDNVFKIGFTSLVTYQTAKFSGVDPKTAAFLISAIFIL PFVLFSATAGQLADKYDKARLTRFVKSFEIALMAVGAAGFVTHGAPLLYLCTFMMGMHSTLFGPVKYSYLPQHLNDHELV GGNGLVEMGTFVAILIGTIVGGAAAGISGRGELLLAVCCVGIALVGRVAAAGVPATPAPQPKLAINWNPFSETWRNLKLA RENRTVFLSLLGISWLWFVGATFLTSFFGFAKDVLSANPDVVTVLLATFSFGIGLGSLLCERLSRRRVEIGLVPLGSLGI SVFAIELYFASHALPTQTHLLTIGEFLGHAAHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALF MIVSALMAMLLTKAGVSIPGIFLVTALLNVVVASYIYSLVPEFLLRFIAWALVHTFYRIRLVHAERIPDEGAALLVCNHV SYVDALVLAAASPRPIRFVMDHRIFNTRFASWAFRHAKAIPIAPRHEDPEMLARAYDACEAALREGELVCIFPEGKLTKT GDVNTFHHGVTEILTRARAPVVPMALRGLWGSVFSRHEDARWPRPVKRGVMSRLTLAVGEPIPAAAATPEALQAVVAELR GARK
Sequences:
>Translated_644_residues MSDPSITSTARREKRRAHPSQFDLLRERRFAPFFATQFMGALNDNVFKIGFTSLVTYQTAKFSGVDPKTAAFLISAIFIL PFVLFSATAGQLADKYDKARLTRFVKSFEIALMAVGAAGFVTHGAPLLYLCTFMMGMHSTLFGPVKYSYLPQHLNDHELV GGNGLVEMGTFVAILIGTIVGGAAAGISGRGELLLAVCCVGIALVGRVAAAGVPATPAPQPKLAINWNPFSETWRNLKLA RENRTVFLSLLGISWLWFVGATFLTSFFGFAKDVLSANPDVVTVLLATFSFGIGLGSLLCERLSRRRVEIGLVPLGSLGI SVFAIELYFASHALPTQTHLLTIGEFLGHAAHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALF MIVSALMAMLLTKAGVSIPGIFLVTALLNVVVASYIYSLVPEFLLRFIAWALVHTFYRIRLVHAERIPDEGAALLVCNHV SYVDALVLAAASPRPIRFVMDHRIFNTRFASWAFRHAKAIPIAPRHEDPEMLARAYDACEAALREGELVCIFPEGKLTKT GDVNTFHHGVTEILTRARAPVVPMALRGLWGSVFSRHEDARWPRPVKRGVMSRLTLAVGEPIPAAAATPEALQAVVAELR GARK >Mature_643_residues SDPSITSTARREKRRAHPSQFDLLRERRFAPFFATQFMGALNDNVFKIGFTSLVTYQTAKFSGVDPKTAAFLISAIFILP FVLFSATAGQLADKYDKARLTRFVKSFEIALMAVGAAGFVTHGAPLLYLCTFMMGMHSTLFGPVKYSYLPQHLNDHELVG GNGLVEMGTFVAILIGTIVGGAAAGISGRGELLLAVCCVGIALVGRVAAAGVPATPAPQPKLAINWNPFSETWRNLKLAR ENRTVFLSLLGISWLWFVGATFLTSFFGFAKDVLSANPDVVTVLLATFSFGIGLGSLLCERLSRRRVEIGLVPLGSLGIS VFAIELYFASHALPTQTHLLTIGEFLGHAAHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFM IVSALMAMLLTKAGVSIPGIFLVTALLNVVVASYIYSLVPEFLLRFIAWALVHTFYRIRLVHAERIPDEGAALLVCNHVS YVDALVLAAASPRPIRFVMDHRIFNTRFASWAFRHAKAIPIAPRHEDPEMLARAYDACEAALREGELVCIFPEGKLTKTG DVNTFHHGVTEILTRARAPVVPMALRGLWGSVFSRHEDARWPRPVKRGVMSRLTLAVGEPIPAAAATPEALQAVVAELRG ARK
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=375, Percent_Identity=25.3333333333333, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 70272; Mature: 70141
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSITSTARREKRRAHPSQFDLLRERRFAPFFATQFMGALNDNVFKIGFTSLVTYQTA CCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHC KFSGVDPKTAAFLISAIFILPFVLFSATAGQLADKYDKARLTRFVKSFEIALMAVGAAGF CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VTHGAPLLYLCTFMMGMHSTLFGPVKYSYLPQHLNDHELVGGNGLVEMGTFVAILIGTIV HHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH GGAAAGISGRGELLLAVCCVGIALVGRVAAAGVPATPAPQPKLAINWNPFSETWRNLKLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHH RENRTVFLSLLGISWLWFVGATFLTSFFGFAKDVLSANPDVVTVLLATFSFGIGLGSLLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH ERLSRRRVEIGLVPLGSLGISVFAIELYFASHALPTQTHLLTIGEFLGHAAHWRILADLF HHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHH LLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFMIVSALMAMLLTKAGVSIPG HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IFLVTALLNVVVASYIYSLVPEFLLRFIAWALVHTFYRIRLVHAERIPDEGAALLVCNHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHH SYVDALVLAAASPRPIRFVMDHRIFNTRFASWAFRHAKAIPIAPRHEDPEMLARAYDACE HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH AALREGELVCIFPEGKLTKTGDVNTFHHGVTEILTRARAPVVPMALRGLWGSVFSRHEDA HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RWPRPVKRGVMSRLTLAVGEPIPAAAATPEALQAVVAELRGARK CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SDPSITSTARREKRRAHPSQFDLLRERRFAPFFATQFMGALNDNVFKIGFTSLVTYQTA CCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHC KFSGVDPKTAAFLISAIFILPFVLFSATAGQLADKYDKARLTRFVKSFEIALMAVGAAGF CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VTHGAPLLYLCTFMMGMHSTLFGPVKYSYLPQHLNDHELVGGNGLVEMGTFVAILIGTIV HHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH GGAAAGISGRGELLLAVCCVGIALVGRVAAAGVPATPAPQPKLAINWNPFSETWRNLKLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHH RENRTVFLSLLGISWLWFVGATFLTSFFGFAKDVLSANPDVVTVLLATFSFGIGLGSLLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH ERLSRRRVEIGLVPLGSLGISVFAIELYFASHALPTQTHLLTIGEFLGHAAHWRILADLF HHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHH LLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFMIVSALMAMLLTKAGVSIPG HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IFLVTALLNVVVASYIYSLVPEFLLRFIAWALVHTFYRIRLVHAERIPDEGAALLVCNHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHH SYVDALVLAAASPRPIRFVMDHRIFNTRFASWAFRHAKAIPIAPRHEDPEMLARAYDACE HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH AALREGELVCIFPEGKLTKTGDVNTFHHGVTEILTRARAPVVPMALRGLWGSVFSRHEDA HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RWPRPVKRGVMSRLTLAVGEPIPAAAATPEALQAVVAELRGARK CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA