Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811921

Identifier: 237811921

GI number: 237811921

Start: 1594088

End: 1594612

Strand: Direct

Name: 237811921

Synonym: GBP346_A1661

Alternate gene names: NA

Gene position: 1594088-1594612 (Clockwise)

Preceding gene: 237811920

Following gene: 237811922

Centisome position: 38.89

GC content: 72.19

Gene sequence:

>525_bases
ATGTCGACCTTACAACGAGTGCTTTTCCTGCTGGGCGTCGCGGCGTGGCCGGCTGCCGGCCGGGCCGACACGCTGCTGCC
CCGAACCCAGGCCTTCACGGTCAGCGCGCAGATCGTCGCGGGCTGCGGCGTCGCGGGCGGCGGGCCGGCGAGCGGCCTGA
ACTTCGGCACGCTCGACTTCGGCGCGCATCCGGCCGTCGCGACGGGGCAGGTGAGCGCGGCCGTCGGCGGCGGCGCGTTG
CAGATCGAATGTTCGCCGGGCTCGACGTTGAAGATGACGATCGACGGCGGCGCGAACGCGAGCGCGGGCAACACGCAGCG
CAATCTGGCGAGCGGCGGCGCGCGCGTTGCATACCGGTTGTATTCGGACCCGGCGCGCACGCAGGCGATCGCGGTCGGGC
AGGCGGTGTCGCTGCCCGTGTCCGGCACGATCACGCTGCCGATCTACGGCGCGCTCACGCTGCCGGGCGGCGGCGCGCCC
GCCGGCACGTATACCGATACCGCGCAGGTCACGCTCAGTTATTAA

Upstream 100 bases:

>100_bases
CTGAACGTCACGCTCGGCTGGTAAGCGAGCGCGCCGTCCCGTTTGGCCTCGCGGCTCGCGCGCAAGCGGGCGGCGAGGCG
GTCCCAGGTTTCCGATCGTC

Downstream 100 bases:

>100_bases
TCAATCAGGAATCCGTGATGAAAGTTTCGAGATCGCCCGGCGCGCCGGCGCGCGCGGCAAGGGCGCTGCGCTGCGCGCTG
CTCGGCGCGGCCGCCGCCGC

Product: Spore Coat Protein U domain protein

Products: NA

Alternate protein names: Type I Pilus Protein CsuB; Spore Coat Protein U Domain-Contain Protein; Spore Coat U; Type 1 Pili Subunit CsuA/B Protein; Fimbrial Protein

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSTLQRVLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGAL
QIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAP
AGTYTDTAQVTLSY

Sequences:

>Translated_174_residues
MSTLQRVLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGAL
QIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAP
AGTYTDTAQVTLSY
>Mature_173_residues
STLQRVLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGALQ
IECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPA
GTYTDTAQVTLSY

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17049; Mature: 16918

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLQRVLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDF
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEECC
GAHPAVATGQVSAAVGGGALQIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRL
CCCCCEECCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEE
YSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTDTAQVTLSY
ECCCCHHEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
STLQRVLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEECC
GAHPAVATGQVSAAVGGGALQIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRL
CCCCCEECCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEE
YSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTDTAQVTLSY
ECCCCHHEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA