| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811882
Identifier: 237811882
GI number: 237811882
Start: 1560247
End: 1561080
Strand: Direct
Name: 237811882
Synonym: GBP346_A1622
Alternate gene names: NA
Gene position: 1560247-1561080 (Clockwise)
Preceding gene: 237811881
Following gene: 237811883
Centisome position: 38.07
GC content: 70.86
Gene sequence:
>834_bases ATGGCGACCGAGCGCTTCGACTGGATCGACCCGTACCCGGCGCAGACGCTGCCGCGTCTGCGGCAGGTGCTCGACGCGCC GTTGACGCATGGGCGCTGGTATGCGCTCGTCGACATGGGTTTCTCGCCGACGCTGCGTGAAGCGCTCGCGGCGCTGAATC CGGACGGCGCGGTGATTGCGCTCTACGAAGGCGTATACGACGGCGACGGGCTGCTCGAGATTTCGCCGTGCGTGACGCCA TTGCCCGACGATGCGGCGCATCGGGCCGAAGTGTGCGCCGGCCTGCTGCGCGAGACCGACGGGCGACCGATGCTGAGCGT GCTGCGCGCGGCACATGGCCTCGACGCGCTCGTCGCGCATTTGCGCGGGCAGATGGAGGCGCGCGCCGCCGACGACGAGG CATTCCTCGTGCGGCTCGCGGATACGCGCTGCGTGCCGACGTGGGCGGGCGTGCTGACGCCCGCGCAGCGCGCGCGCTTT TTTGCGGGTATCGATGCGTGGTGGCTGTTCGATCGCGCGGCTTCGCTTGTCGAGCTCGATGTCGCGCCCGCGGGCAGCGA GACCGCGACGGGGGCCGACGACGGCGAGCCGTATCGCCTCGACGGCGAGCAGATTGCCGCGCTCAGGCACGCGTCGAAGA TCGACACGCTGCTTTTTCACGTGCGCCAGCGGCCGGAAAGCTTCGGACGATTGACGGCGACGCCCTCGCAGGCCTACGCG TGCGTGAGCGAAGCGTGGGCGAAGGAGGACGTGCCGCCGTCGGCGGGCGCGCGGCAGGCGCTCGATGCGCTCGAGGCGGC GGGATGGCTCGTGCCGGCCGAAGTGTCGGCTTAG
Upstream 100 bases:
>100_bases TGGCTCCCGCGCTGCCGCAGTTTCCCGAGAAGGTGTGCGTCGAATGCCTGAAGCACGCGATGCAATCGGGCAGCGCACTG GCCGGCAAGGCGATCTGAGC
Downstream 100 bases:
>100_bases GCGGGGCGGGCGGAACATGACGTGCGGCGAAAGGTGGGGAGGGCGTGGGACAGTGCCGTCGTCCATGCGATCACGGATTC CGCGCTTGACGTCGGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MATERFDWIDPYPAQTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTP LPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARF FAGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA
Sequences:
>Translated_277_residues MATERFDWIDPYPAQTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTP LPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARF FAGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA >Mature_276_residues ATERFDWIDPYPAQTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIALYEGVYDGDGLLEISPCVTPL PDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAHLRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFF AGIDAWWLFDRAASLVELDVAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYAC VSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29895; Mature: 29764
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATERFDWIDPYPAQTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYEGVYDGDGLLEISPCVTPLPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAH EECCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH LRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFFAGIDAWWLFDRAASLVELD HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEE VAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCHHHHHH CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ATERFDWIDPYPAQTLPRLRQVLDAPLTHGRWYALVDMGFSPTLREALAALNPDGAVIA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYEGVYDGDGLLEISPCVTPLPDDAAHRAEVCAGLLRETDGRPMLSVLRAAHGLDALVAH EECCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH LRGQMEARAADDEAFLVRLADTRCVPTWAGVLTPAQRARFFAGIDAWWLFDRAASLVELD HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHEEEE VAPAGSETATGADDGEPYRLDGEQIAALRHASKIDTLLFHVRQRPESFGRLTATPSQAYA CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEECCHHHHHH CVSEAWAKEDVPPSAGARQALDALEAAGWLVPAEVSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA