| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is ycgJ [H]
Identifier: 237811860
GI number: 237811860
Start: 1538080
End: 1538430
Strand: Direct
Name: ycgJ [H]
Synonym: GBP346_A1600
Alternate gene names: 237811860
Gene position: 1538080-1538430 (Clockwise)
Preceding gene: 237811859
Following gene: 237811862
Centisome position: 37.53
GC content: 65.81
Gene sequence:
>351_bases ATGGCGGCGCTGCCATTGATTGCGATTGCGGCGAGCGCGCACGCGCAGCCGCGTCATCCTGCCGTTTATTCGCCCGCCGC CGGCGTGCTGTGCGATCGGTACGTCTGCGCGGATGTCCAGGGCATCTCGCGCGCGCTGACCGAGCGATATCTCGGCAAGC GCGTGGCCGCGAAGGCGTTTTCACAAGGCGATTTCGATCCGACCGAATTCACGTTCGCCAACGGCGTGTTCTGTGACGTG AAAGAGCGGCTCTGTCGCGACGATCGCTATTACGGCGCGGACGGCAAGCGCAGCGGCGCGGTGTCCCGGCGGTATACCGA ATTGCTGTTCGGCCGCCGATCCGGCGGCTGA
Upstream 100 bases:
>100_bases CTCGGCGGCACGGGCTTGCTGATCGGCGCGGCGCAGGCGGTCGTTCGCCGGTCCGCGCGCCGCCGATAGGGCACGGCCGA TGAAGTCGAGCGTTTTGTTC
Downstream 100 bases:
>100_bases TCAGGCTCACGAGCGGCCTGGCCCGCTCGTGGCGAAATTCCCATTCTTCGCTTACATCTCGACGCGATTCGCCGATGCGG TTCGGTGAGCGTCCGCTCCG
Product: fels-1 prophage domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDV KERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG
Sequences:
>Translated_116_residues MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDV KERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG >Mature_115_residues AALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAFSQGDFDPTEFTFANGVFCDVK ERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787425, Length=90, Percent_Identity=57.7777777777778, Blast_Score=119, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008617 [H]
Pfam domain/function: PF05666 Fels1 [H]
EC number: NA
Molecular weight: Translated: 12621; Mature: 12490
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAF CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQGDFDPTEFTFANGVFCDVKERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG CCCCCCCCCEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AALPLIAIAASAHAQPRHPAVYSPAAGVLCDRYVCADVQGISRALTERYLGKRVAAKAF CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQGDFDPTEFTFANGVFCDVKERLCRDDRYYGADGKRSGAVSRRYTELLFGRRSGG CCCCCCCCCEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]