| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811703
Identifier: 237811703
GI number: 237811703
Start: 1389829
End: 1390476
Strand: Reverse
Name: 237811703
Synonym: GBP346_A1441
Alternate gene names: NA
Gene position: 1390476-1389829 (Counterclockwise)
Preceding gene: 237811704
Following gene: 237811702
Centisome position: 33.93
GC content: 70.52
Gene sequence:
>648_bases ATGCCGTCGTCGGCGATCGCCATGCCGTCGTCGGCGATCGACAAGCCCGGCCGTGCAATCGATCCATGCGCCTTGCCGGC ACGGCCGGCAACCGGCGAGCCGTCTCGCGCATCGGCCGCCGGCCGCGCCCGGCAGTCGTCACGCTCTTTGACGGCCGAGC CATGCCAGGCTTCCAACACGGACCGACATGTCATCGGCGCGGCATGCGCCGCCGTGCTCGGCGCAACCGCAACCGCGGCG GCGCACGCGCAAAGCAGCGTCGCGCTCCACGGGCTGCTCGACGCGAGCATCGCGTACACGAACAATCAATCGGGCAAGCA CGCGTGGGGCAAGCACACGTGGCGGCAAGGCCGCGGCCTGCCGTCGAACACGGTGTTCGGCCTGAGCGGCAGCGACGGGC CGGGCGCTCGGCTTCGCGTCGCCCCACGTGCCGGGCGCATCGTCGACGCATACGCAAGTCGCGGCGACGATCGCCATCCG GCATCGGTTCCGACGGCGCGCCGCGAACGCCACCGAGCGTCCGGCGCGCGAACTCGGCGTGCCGCCGCCGCGGGCGAAAG CGCATTGGAGGGCCCGACCGGTGGTAGAATGCGCTCCGCCCTTGCCGGGGTGATGAAATTGGTAAACATAGCGGACTTAA ACGATTGA
Upstream 100 bases:
>100_bases GCCCGCGCGCCGCGCATGCCACCACGCGGCTGACCGGATTGCGTCGGCACGCCGGCGTCCCGCATCCGCCATTCGACGGA TGGGTCCGGCATGGTTCGCC
Downstream 100 bases:
>100_bases GTGCCCGGCCGGAAACGGCCGGTGCAGAACCCTTCAAATTCGGCGAAACCCCTGGCGCGCGACGCGCCGAGGCAACGCCG AGCCAAGTCCCGAGACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPSSAIAMPSSAIDKPGRAIDPCALPARPATGEPSRASAAGRARQSSRSLTAEPCQASNTDRHVIGAACAAVLGATATAA AHAQSSVALHGLLDASIAYTNNQSGKHAWGKHTWRQGRGLPSNTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHP ASVPTARRERHRASGARTRRAAAAGESALEGPTGGRMRSALAGVMKLVNIADLND
Sequences:
>Translated_215_residues MPSSAIAMPSSAIDKPGRAIDPCALPARPATGEPSRASAAGRARQSSRSLTAEPCQASNTDRHVIGAACAAVLGATATAA AHAQSSVALHGLLDASIAYTNNQSGKHAWGKHTWRQGRGLPSNTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHP ASVPTARRERHRASGARTRRAAAAGESALEGPTGGRMRSALAGVMKLVNIADLND >Mature_214_residues PSSAIAMPSSAIDKPGRAIDPCALPARPATGEPSRASAAGRARQSSRSLTAEPCQASNTDRHVIGAACAAVLGATATAAA HAQSSVALHGLLDASIAYTNNQSGKHAWGKHTWRQGRGLPSNTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHPA SVPTARRERHRASGARTRRAAAAGESALEGPTGGRMRSALAGVMKLVNIADLND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21967; Mature: 21836
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSAIAMPSSAIDKPGRAIDPCALPARPATGEPSRASAAGRARQSSRSLTAEPCQASNT CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC DRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHAWGKHTWRQGRGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCC PSNTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHPASVPTARRERHRASGARTRR CCCCEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AAAAGESALEGPTGGRMRSALAGVMKLVNIADLND HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PSSAIAMPSSAIDKPGRAIDPCALPARPATGEPSRASAAGRARQSSRSLTAEPCQASNT CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC DRHVIGAACAAVLGATATAAAHAQSSVALHGLLDASIAYTNNQSGKHAWGKHTWRQGRGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCC PSNTVFGLSGSDGPGARLRVAPRAGRIVDAYASRGDDRHPASVPTARRERHRASGARTRR CCCCEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AAAAGESALEGPTGGRMRSALAGVMKLVNIADLND HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA