| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811612
Identifier: 237811612
GI number: 237811612
Start: 1293397
End: 1294029
Strand: Reverse
Name: 237811612
Synonym: GBP346_A1344
Alternate gene names: NA
Gene position: 1294029-1293397 (Counterclockwise)
Preceding gene: 237811615
Following gene: 237811611
Centisome position: 31.57
GC content: 74.25
Gene sequence:
>633_bases GTGGTGCTCGATTCGAACGTCTGGATCGATATCCTCGTGTTCGACGACCCCGCCGCCCGCCCGATCCGCGATGCCCTCGA GACGGGCGCCATCACGGCGCTCATCGACGTCCGCTGCCTGATCGAGCTCGAACGCGTGCTCGACTACCCGCAGTTCAAGG CGCGCGCGGTCGACAAGGCCGCCGCGCTCGCCACGGTCGCGCGCCTGTCGGAGCGCGTCGCGGGGCCCGAACGCCGTGAC GCGCGCGCGCACGCCGCGACGGCGGCGGGCGCGCACGCATCGCCCGCCCTCGCCGCGTCGCCCGCGCACATCGCCGATAG CGGAAATGCGCGAAGCGGCGCGTGCGGCACGCCTGCGCCGCACGCGCGAGCGTGCCCACCGCCTTGCGCCGACGCGGCCG CGCGCGCTCCCGCCGACGACGCACCGCCGCGCCCGCTGCCGAAATGCCGGGACCGCGACGATCAGAAATTCCTCGAGCTC GCTTATACGGCGCGCGCCGACTGGCTCGTCTCGAAGGATCGCGCGCTGTTGAAGCTCACCCGCCGCACCGAGCGCGACTT CGGCTTCCGGATCGCGCAGCCCGCGCCGTTCGCCGCGAGCGCGCTCGCGGCCGACGCATCCGAGCCGGCGTAA
Upstream 100 bases:
>100_bases TTATCATAGAGGCTCGCCGGCACGCCGTGCCGCGCAATCAGACGAAAACCACCGATTGTAACGAATGCCCAGCTCCGACG CTCCCCGCGCCGGTCGCCGC
Downstream 100 bases:
>100_bases GCGACGCACTCGCCCGAGCCGCCCCCACCCCTTTTCGCGCAAGCCATGATGAACGCACCGCACGACATGCCGACGACGCC CACTCTCCTCTCGCGCCTGC
Product: nucleotide binding protein PINc
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
Sequences:
>Translated_210_residues MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA >Mature_210_residues MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARLSERVAGPERRD ARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLEL AYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22244; Mature: 22244
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKA CEECCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AALATVARLSERVAGPERRDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC HARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADWLVSKDRALLKLT CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH RRTERDFGFRIAQPAPFAASALAADASEPA HHHHHCCCEEECCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKA CEECCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AALATVARLSERVAGPERRDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC HARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADWLVSKDRALLKLT CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH RRTERDFGFRIAQPAPFAASALAADASEPA HHHHHCCCEEECCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA