Click here to switch to the map view.

The map label for this gene is ywcH [H]

Identifier: 23502899

GI number: 23502899

Start: 1976699

End: 1977721

Strand: Reverse

Name: ywcH [H]

Synonym: BR2051

Alternate gene names: 23502899

Gene position: 1977721-1976699 (Counterclockwise)

Preceding gene: 23502900

Following gene: 23502897

Centisome position: 93.83

GC content: 59.53

Gene sequence:

>1023_bases
ATGAAGAAAATCGGCTTTCTGTCCTTTGGCCACTGGTCGCCCGCGCCCCAGTCTGGCACACGCTCGGCCGGTGATACGCT
TCTGCAATCGATCGATCTTGCTGTCGCCGCCGAGGAACTGGGGGCGGATGGCGCCTATTTTCGCGTGCACCATTTTGCGC
GCCAGCTCGCTTCGCCTTTTCCGCTGCTTGCAGCCATCGGGGCAAAGACAAGCAGGATCGAGATCGGCACCGCCGTCATC
GACATGCGCTATGAAAATCCGTTCTATATGGTCGAGGATGCTGGCGCTGCGGACCTGATCTCCAAGGGCCGTTTGCAGCT
TGGCATCAGCCGTGGTTCGCCGGAACAGGTGATCGATGGCTGGCGTTATTTCGGCTACAAGCCGGAAGAAGGCAAGACCG
ATGCCGATATGGGCCGGCGCCATGCGGAAGTGTTTCTGGAGGCATTGAAGGGGGAGGGGTTTGCGCAACCCAATCCCCGG
CCGATGTTCCCCAACCCGCCCGGCCTGTTGCGGATCGAGCCGCATTCGGACGGCCTTCGGGATCGTATCTGGTGGGGGGC
AGGCTCCAATGCGACCGCGCAATGGGCAGCCAGGCTTGGCATGAACCTGCAAAGTTCAACCTTGAAAGACGATGAAACGG
GGGAGCCGTTCCATGTGCAGCAGGCCAGGCAGATCCGCATCTATCGTGAGGCGTGGAAGGAGGCTGGACATACGCGCACG
CCGCGTGTTTCGGTGAGCCGCAGCATCTTTGCATTGGTCAATGACCGGGACCGTGCCTATTTTGGCAATGGCGGCAAGGA
GCAGGACTCCATTGGCTATATTGATGAGAATACACGGGCGATCTTTGGCCGTTCCTATGCGGCGGAGCCAGATGCGCTCA
TTGAGGAACTGAAGCGGGACGAGGCTATTGCCGAAGCCGATACGCTGCTTTTGAACGTGCCGAACCAGCGTGGTGTCGAC
TACAACGCGCATGTAATCGAGGCTATCCTCAAGCATGTCGCACCGGCTCTTGGCTGGCGTTGA

Upstream 100 bases:

>100_bases
TGCTGAACACTGTGTCCTTCTTCGGCGCCCTTTCAATCGTGTTCAGGGCCGCCATATTGGGCGCAAACCAATCTTACGCC
CGAAACCAGGAAATAACTTC

Downstream 100 bases:

>100_bases
TCTGTGAGAGCAGGCAGCAAACCCTGCCTGCTCTCATTCTATACCGTAAATCGCCAGAAGCTTCTTCATGCGGCGGGTGG
CGAGGTCTGGCCGGTCGAGC

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKKIGFLSFGHWSPAPQSGTRSAGDTLLQSIDLAVAAEELGADGAYFRVHHFARQLASPFPLLAAIGAKTSRIEIGTAVI
DMRYENPFYMVEDAGAADLISKGRLQLGISRGSPEQVIDGWRYFGYKPEEGKTDADMGRRHAEVFLEALKGEGFAQPNPR
PMFPNPPGLLRIEPHSDGLRDRIWWGAGSNATAQWAARLGMNLQSSTLKDDETGEPFHVQQARQIRIYREAWKEAGHTRT
PRVSVSRSIFALVNDRDRAYFGNGGKEQDSIGYIDENTRAIFGRSYAAEPDALIEELKRDEAIAEADTLLLNVPNQRGVD
YNAHVIEAILKHVAPALGWR

Sequences:

>Translated_340_residues
MKKIGFLSFGHWSPAPQSGTRSAGDTLLQSIDLAVAAEELGADGAYFRVHHFARQLASPFPLLAAIGAKTSRIEIGTAVI
DMRYENPFYMVEDAGAADLISKGRLQLGISRGSPEQVIDGWRYFGYKPEEGKTDADMGRRHAEVFLEALKGEGFAQPNPR
PMFPNPPGLLRIEPHSDGLRDRIWWGAGSNATAQWAARLGMNLQSSTLKDDETGEPFHVQQARQIRIYREAWKEAGHTRT
PRVSVSRSIFALVNDRDRAYFGNGGKEQDSIGYIDENTRAIFGRSYAAEPDALIEELKRDEAIAEADTLLLNVPNQRGVD
YNAHVIEAILKHVAPALGWR
>Mature_340_residues
MKKIGFLSFGHWSPAPQSGTRSAGDTLLQSIDLAVAAEELGADGAYFRVHHFARQLASPFPLLAAIGAKTSRIEIGTAVI
DMRYENPFYMVEDAGAADLISKGRLQLGISRGSPEQVIDGWRYFGYKPEEGKTDADMGRRHAEVFLEALKGEGFAQPNPR
PMFPNPPGLLRIEPHSDGLRDRIWWGAGSNATAQWAARLGMNLQSSTLKDDETGEPFHVQQARQIRIYREAWKEAGHTRT
PRVSVSRSIFALVNDRDRAYFGNGGKEQDSIGYIDENTRAIFGRSYAAEPDALIEELKRDEAIAEADTLLLNVPNQRGVD
YNAHVIEAILKHVAPALGWR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 37656; Mature: 37656

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGFLSFGHWSPAPQSGTRSAGDTLLQSIDLAVAAEELGADGAYFRVHHFARQLASPF
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PLLAAIGAKTSRIEIGTAVIDMRYENPFYMVEDAGAADLISKGRLQLGISRGSPEQVIDG
HHHHHHCCCCCEEEECEEEEEEEECCCEEEEECCCHHHHHHCCCEEEEECCCCHHHHHHH
WRYFGYKPEEGKTDADMGRRHAEVFLEALKGEGFAQPNPRPMFPNPPGLLRIEPHSDGLR
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
DRIWWGAGSNATAQWAARLGMNLQSSTLKDDETGEPFHVQQARQIRIYREAWKEAGHTRT
CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
PRVSVSRSIFALVNDRDRAYFGNGGKEQDSIGYIDENTRAIFGRSYAAEPDALIEELKRD
CCEECCCEEEEEECCCCCEEECCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHH
EAIAEADTLLLNVPNQRGVDYNAHVIEAILKHVAPALGWR
HHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGFLSFGHWSPAPQSGTRSAGDTLLQSIDLAVAAEELGADGAYFRVHHFARQLASPF
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PLLAAIGAKTSRIEIGTAVIDMRYENPFYMVEDAGAADLISKGRLQLGISRGSPEQVIDG
HHHHHHCCCCCEEEECEEEEEEEECCCEEEEECCCHHHHHHCCCEEEEECCCCHHHHHHH
WRYFGYKPEEGKTDADMGRRHAEVFLEALKGEGFAQPNPRPMFPNPPGLLRIEPHSDGLR
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
DRIWWGAGSNATAQWAARLGMNLQSSTLKDDETGEPFHVQQARQIRIYREAWKEAGHTRT
CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
PRVSVSRSIFALVNDRDRAYFGNGGKEQDSIGYIDENTRAIFGRSYAAEPDALIEELKRD
CCEECCCEEEEEECCCCCEEECCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHH
EAIAEADTLLLNVPNQRGVDYNAHVIEAILKHVAPALGWR
HHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]