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The map label for this gene is yafV [C]

Identifier: 23502728

GI number: 23502728

Start: 1812401

End: 1813255

Strand: Reverse

Name: yafV [C]

Synonym: BR1875

Alternate gene names: 23502728

Gene position: 1813255-1812401 (Counterclockwise)

Preceding gene: 23502729

Following gene: 23502727

Centisome position: 86.03

GC content: 60.0

Gene sequence:

>855_bases
ATGAGCACCTTTCGCGCTGCCGCAATCCAGATGCGTTCGGGCATTGATGTCGTCCGCAATGTGGAGGCTCTCGAAAAACT
GGTCGCAGATGCGGCAGCGCAAGGCGCCCATTATATCCAGACGCCGGAAATGACCGGCGCGCTGATGCGCGACCGTCCGG
CCCTTTTTGCAAGCGTGCGCGATGAAGAGAACGACCTGGTCTTCCGGGCGGCTCGCGCACTGGCGGCCAGGCATGGCGTC
TTCCTGCATATCGGTTCGACGGCAATCGATGCAGGCACCGGCAAGATCGCCAATCGCGGCGGGATTTTTGCGCCATCGGG
CGAAAAGATCGCCACTTATGACAAGATTCATATGTTCGATGTCGATCTCGACAATGGCGAAAGCTGGCGCGAATCGGCGG
CCTGTGAGCCCGGCAGGCAAGCCGTCATCGCGGAACTGCCTTTCGCCAAAGTGGGCATGGCGATCTGCTACGATATCCGT
TTCCCGCAGCTTTTTCAGGCACAGGCGCTGGCTGGCGCAAATGTCATCACCGACCCTGCTGCTTTCACGCGCCAGACTGG
TGAAGCCCATTGGCACGTTCTGCAGCGCGCACGCGCTATCGAGAATGGCGCGTTCCTGATTTCCGCGGCACAGGGCGGGC
TGCATGAAGATGGCCGTGAAACCTATGGTCATTCGATTATCGTTTCACCCTGGGGCAAGGTGCTGGCGGAGGCTGCCCAT
GACGAACCCGGCGTGATCGTTGCCGATATCGACCTGTCGGAAAGCACGGCGGCACGCGCCAAGGTGCCGAACCTGAAGAA
TGCGCGGGAATTTGAGGTGAGCCTCGTTTGTGCGAGCCAGAAAGAGGATGCGTAA

Upstream 100 bases:

>100_bases
TCGGTTCATGTCGGCGGCTGCGACGATCTTTATGCACTGGAAGACGAGGGCAAGCTCGATAGCCTGCTGAAAACCGGCAA
ACTTATTTAGAGGTCAAATC

Downstream 100 bases:

>100_bases
GATCCATGATCCGCTTTTCGCTTCATTGCGATCACGGCCATGAATTTGAGGGCTGGTTCCGGGACAATGCCGATTTCGAG
CGGCAGTCGGAAATGAAGCT

Product: carbon-nitrogen hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSTFRAAAIQMRSGIDVVRNVEALEKLVADAAAQGAHYIQTPEMTGALMRDRPALFASVRDEENDLVFRAARALAARHGV
FLHIGSTAIDAGTGKIANRGGIFAPSGEKIATYDKIHMFDVDLDNGESWRESAACEPGRQAVIAELPFAKVGMAICYDIR
FPQLFQAQALAGANVITDPAAFTRQTGEAHWHVLQRARAIENGAFLISAAQGGLHEDGRETYGHSIIVSPWGKVLAEAAH
DEPGVIVADIDLSESTAARAKVPNLKNAREFEVSLVCASQKEDA

Sequences:

>Translated_284_residues
MSTFRAAAIQMRSGIDVVRNVEALEKLVADAAAQGAHYIQTPEMTGALMRDRPALFASVRDEENDLVFRAARALAARHGV
FLHIGSTAIDAGTGKIANRGGIFAPSGEKIATYDKIHMFDVDLDNGESWRESAACEPGRQAVIAELPFAKVGMAICYDIR
FPQLFQAQALAGANVITDPAAFTRQTGEAHWHVLQRARAIENGAFLISAAQGGLHEDGRETYGHSIIVSPWGKVLAEAAH
DEPGVIVADIDLSESTAARAKVPNLKNAREFEVSLVCASQKEDA
>Mature_283_residues
STFRAAAIQMRSGIDVVRNVEALEKLVADAAAQGAHYIQTPEMTGALMRDRPALFASVRDEENDLVFRAARALAARHGVF
LHIGSTAIDAGTGKIANRGGIFAPSGEKIATYDKIHMFDVDLDNGESWRESAACEPGRQAVIAELPFAKVGMAICYDIRF
PQLFQAQALAGANVITDPAAFTRQTGEAHWHVLQRARAIENGAFLISAAQGGLHEDGRETYGHSIIVSPWGKVLAEAAHD
EPGVIVADIDLSESTAARAKVPNLKNAREFEVSLVCASQKEDA

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=271, Percent_Identity=31.7343173431734, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI297632348, Length=268, Percent_Identity=35.8208955223881, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI5031947, Length=269, Percent_Identity=36.0594795539033, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI297632350, Length=268, Percent_Identity=35.8208955223881, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI297632346, Length=191, Percent_Identity=33.5078534031414, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1786412, Length=189, Percent_Identity=27.5132275132275, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17556280, Length=268, Percent_Identity=31.7164179104478, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6322335, Length=296, Percent_Identity=31.0810810810811, Blast_Score=155, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6323383, Length=202, Percent_Identity=37.6237623762376, Blast_Score=139, Evalue=4e-34,
Organism=Drosophila melanogaster, GI17933642, Length=261, Percent_Identity=34.8659003831418, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI21355835, Length=265, Percent_Identity=32.0754716981132, Blast_Score=137, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30491; Mature: 30360

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFRAAAIQMRSGIDVVRNVEALEKLVADAAAQGAHYIQTPEMTGALMRDRPALFASVR
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHEEECC
DEENDLVFRAARALAARHGVFLHIGSTAIDAGTGKIANRGGIFAPSGEKIATYDKIHMFD
CCCCHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCCCEECCCCCEEEEEEEEEEEE
VDLDNGESWRESAACEPGRQAVIAELPFAKVGMAICYDIRFPQLFQAQALAGANVITDPA
EECCCCCCHHHHCCCCCCCCEEEEECCHHHHCHHHEEECCCCHHHHHHHHCCCCEECCCH
AFTRQTGEAHWHVLQRARAIENGAFLISAAQGGLHEDGRETYGHSIIVSPWGKVLAEAAH
HHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCEEEECCHHHHHHHHCC
DEPGVIVADIDLSESTAARAKVPNLKNAREFEVSLVCASQKEDA
CCCCEEEEEECCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
STFRAAAIQMRSGIDVVRNVEALEKLVADAAAQGAHYIQTPEMTGALMRDRPALFASVR
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHEEECC
DEENDLVFRAARALAARHGVFLHIGSTAIDAGTGKIANRGGIFAPSGEKIATYDKIHMFD
CCCCHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCCCEECCCCCEEEEEEEEEEEE
VDLDNGESWRESAACEPGRQAVIAELPFAKVGMAICYDIRFPQLFQAQALAGANVITDPA
EECCCCCCHHHHCCCCCCCCEEEEECCHHHHCHHHEEECCCCHHHHHHHHCCCCEECCCH
AFTRQTGEAHWHVLQRARAIENGAFLISAAQGGLHEDGRETYGHSIIVSPWGKVLAEAAH
HHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCEEEECCHHHHHHHHCC
DEPGVIVADIDLSESTAARAKVPNLKNAREFEVSLVCASQKEDA
CCCCEEEEEECCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]