| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is dppD [H]
Identifier: 23502447
GI number: 23502447
Start: 1531414
End: 1532262
Strand: Reverse
Name: dppD [H]
Synonym: BR1583
Alternate gene names: 23502447
Gene position: 1532262-1531414 (Counterclockwise)
Preceding gene: 23502448
Following gene: 23502446
Centisome position: 72.7
GC content: 56.18
Gene sequence:
>849_bases GTGCTACTCGATATTAAAAATCTCACGGTTTCCTTCGATACATCCACTGGCCCGTTCAAGGCGGTGGACGGGATCGACAT CACCGTTAACAAGGGTGAAGTGCTGGCCATCGTCGGCGAATCCGGTTCGGGCAAGTCCGTCGGAATGCTGGCGGTTATGG GTCTTTTGCCAAAGACTGCGACCGTAACCGCCGATGTGATGATGTTCGACGGCATGGACCTGCGCACCCTGTCCGACAGT CAGCGCCGCAAGATCATCGGCCGCGATATTTCGATGATCTTTCAGGAGCCCGTAGCAAGCCTCAATCCGTGTTTCACGGT CGGCTATCAGCTTGAGGAAGTCCTGAAGCAGCATATGGGTATGGGGGCTTCTGCAAGCCGTGCCCGCGCTATCGAGCTTC TGAAACTGGTCGGTATCCGTGATGCGGTGGAGCGTCTGAAAAGCTTCCCGCACCAGATGTCGGGCGGCCAGTGCCAGCGC GTGATGATCGCGATTGCGATTGCCTGTAATCCGAAGCTCCTGATTGCCGACGAACCCACGACCGCACTCGATGTGACGAT CCAGAAGCAGATTCTCGATCTCCTGATGCGGCTTCAGGTGGAGCACGGCATGGGCCTCATCATAATTACCCATGATATGG GTGTGGTGGCTGAAACGGCAGACCGGGTTATCGTGCAATACAAGGGCCACAAGATGGAAGATGCCGACGTGCTGTCGCTG TTTTCCGCGCCCAAGCACCCTTACACCCGTGCGCTGCTCTCGGCCCTGCCGGAAAATGCGACTGGTAATCGTCTTCCGAC GGTTTCTGATTTTGTCTTTGAGAATATCAGTGCAGGAGAAGCGCGATGA
Upstream 100 bases:
>100_bases TCCCCGGCCTTGCGATCCTCATCACTGTTCTCGCCATCAATCTGATCGGCGACGGTCTGCGCGATGCGCTTGATCCGAAG CTAAAGCGGAGTTGATCGAA
Downstream 100 bases:
>100_bases GCGAGATCGTTCTCGAGGCGCGCGACATCAAGCGCGATTATCATGTTGGCGGCGGCCTGTTCGGCAAGCCGAAAGTTGTT CATGCCGTCAAGGGGGTGAG
Product: dipeptide ABC transporter ATP-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLLDIKNLTVSFDTSTGPFKAVDGIDITVNKGEVLAIVGESGSGKSVGMLAVMGLLPKTATVTADVMMFDGMDLRTLSDS QRRKIIGRDISMIFQEPVASLNPCFTVGYQLEEVLKQHMGMGASASRARAIELLKLVGIRDAVERLKSFPHQMSGGQCQR VMIAIAIACNPKLLIADEPTTALDVTIQKQILDLLMRLQVEHGMGLIIITHDMGVVAETADRVIVQYKGHKMEDADVLSL FSAPKHPYTRALLSALPENATGNRLPTVSDFVFENISAGEAR
Sequences:
>Translated_282_residues MLLDIKNLTVSFDTSTGPFKAVDGIDITVNKGEVLAIVGESGSGKSVGMLAVMGLLPKTATVTADVMMFDGMDLRTLSDS QRRKIIGRDISMIFQEPVASLNPCFTVGYQLEEVLKQHMGMGASASRARAIELLKLVGIRDAVERLKSFPHQMSGGQCQR VMIAIAIACNPKLLIADEPTTALDVTIQKQILDLLMRLQVEHGMGLIIITHDMGVVAETADRVIVQYKGHKMEDADVLSL FSAPKHPYTRALLSALPENATGNRLPTVSDFVFENISAGEAR >Mature_282_residues MLLDIKNLTVSFDTSTGPFKAVDGIDITVNKGEVLAIVGESGSGKSVGMLAVMGLLPKTATVTADVMMFDGMDLRTLSDS QRRKIIGRDISMIFQEPVASLNPCFTVGYQLEEVLKQHMGMGASASRARAIELLKLVGIRDAVERLKSFPHQMSGGQCQR VMIAIAIACNPKLLIADEPTTALDVTIQKQILDLLMRLQVEHGMGLIIITHDMGVVAETADRVIVQYKGHKMEDADVLSL FSAPKHPYTRALLSALPENATGNRLPTVSDFVFENISAGEAR
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI9961250, Length=232, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI171184400, Length=238, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI42741659, Length=245, Percent_Identity=28.9795918367347, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI42490749, Length=256, Percent_Identity=29.6875, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI116734710, Length=236, Percent_Identity=25, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI105990541, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI148612844, Length=215, Percent_Identity=28.8372093023256, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI9665248, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI1789963, Length=259, Percent_Identity=55.2123552123552, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI145693107, Length=263, Percent_Identity=49.0494296577947, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=44.6564885496183, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1788506, Length=267, Percent_Identity=46.4419475655431, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI48994883, Length=268, Percent_Identity=44.7761194029851, Blast_Score=224, Evalue=4e-60, Organism=Escherichia coli, GI1787759, Length=265, Percent_Identity=41.1320754716981, Blast_Score=211, Evalue=5e-56, Organism=Escherichia coli, GI1787500, Length=267, Percent_Identity=41.5730337078652, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1789962, Length=263, Percent_Identity=38.7832699619772, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1787758, Length=263, Percent_Identity=38.0228136882129, Blast_Score=168, Evalue=4e-43, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=41.8803418803419, Blast_Score=168, Evalue=4e-43, Organism=Escherichia coli, GI48994997, Length=262, Percent_Identity=33.587786259542, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787547, Length=262, Percent_Identity=30.1526717557252, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789891, Length=240, Percent_Identity=35.4166666666667, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1786398, Length=258, Percent_Identity=33.7209302325581, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1788225, Length=262, Percent_Identity=34.3511450381679, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=33.739837398374, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787089, Length=240, Percent_Identity=34.5833333333333, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1789672, Length=246, Percent_Identity=32.1138211382114, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1789032, Length=248, Percent_Identity=29.4354838709677, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI87081791, Length=253, Percent_Identity=34.3873517786561, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=32.6271186440678, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI87081709, Length=243, Percent_Identity=30.0411522633745, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787370, Length=243, Percent_Identity=29.6296296296296, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788761, Length=258, Percent_Identity=29.8449612403101, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=33.4883720930233, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787105, Length=223, Percent_Identity=34.9775784753363, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=31.9634703196347, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1787712, Length=245, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788450, Length=266, Percent_Identity=25.9398496240602, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788644, Length=252, Percent_Identity=28.968253968254, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1790162, Length=257, Percent_Identity=26.4591439688716, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1786563, Length=218, Percent_Identity=30.2752293577982, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=29.6296296296296, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786345, Length=215, Percent_Identity=28.3720930232558, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=31.1004784688995, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=29.8076923076923, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1790544, Length=280, Percent_Identity=25.3571428571429, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790739, Length=238, Percent_Identity=27.3109243697479, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=27.0386266094421, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789991, Length=270, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=28.8793103448276, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87082268, Length=234, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87082267, Length=244, Percent_Identity=27.8688524590164, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786319, Length=203, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790467, Length=228, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789586, Length=268, Percent_Identity=27.2388059701493, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788053, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87081782, Length=228, Percent_Identity=25.8771929824561, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=27.7272727272727, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786698, Length=220, Percent_Identity=24.5454545454545, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786653, Length=275, Percent_Identity=24.7272727272727, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193202349, Length=233, Percent_Identity=29.1845493562232, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534520, Length=227, Percent_Identity=30.8370044052863, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17567265, Length=226, Percent_Identity=28.3185840707965, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17569143, Length=215, Percent_Identity=28.3720930232558, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17541710, Length=228, Percent_Identity=29.3859649122807, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI212646699, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17567269, Length=219, Percent_Identity=29.2237442922374, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193209708, Length=216, Percent_Identity=31.4814814814815, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115535101, Length=219, Percent_Identity=28.310502283105, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17569145, Length=222, Percent_Identity=27.9279279279279, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17558664, Length=174, Percent_Identity=32.7586206896552, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193208177, Length=232, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533592, Length=226, Percent_Identity=31.858407079646, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17511077, Length=214, Percent_Identity=30.3738317757009, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211017, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193211015, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71984940, Length=235, Percent_Identity=28.0851063829787, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533608, Length=207, Percent_Identity=28.9855072463768, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6323217, Length=265, Percent_Identity=26.7924528301887, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319856, Length=221, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322640, Length=195, Percent_Identity=31.2820512820513, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007328, Length=225, Percent_Identity=28, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI28574150, Length=225, Percent_Identity=28, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI17136662, Length=225, Percent_Identity=27.5555555555556, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726357, Length=256, Percent_Identity=28.515625, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659289, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI19920532, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580930, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI23397593, Length=246, Percent_Identity=31.3008130081301, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI281363262, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24653245, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 30538; Mature: 30538
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50042 CNMP_BINDING_3 ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDIKNLTVSFDTSTGPFKAVDGIDITVNKGEVLAIVGESGSGKSVGMLAVMGLLPKTA CEEEEEEEEEEEECCCCCEEEECCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCH TVTADVMMFDGMDLRTLSDSQRRKIIGRDISMIFQEPVASLNPCFTVGYQLEEVLKQHMG HEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCC MGASASRARAIELLKLVGIRDAVERLKSFPHQMSGGQCQRVMIAIAIACNPKLLIADEPT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCCEEEEECCCC TALDVTIQKQILDLLMRLQVEHGMGLIIITHDMGVVAETADRVIVQYKGHKMEDADVLSL CEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCEEEEEECCCCCCCHHHHHH FSAPKHPYTRALLSALPENATGNRLPTVSDFVFENISAGEAR HCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MLLDIKNLTVSFDTSTGPFKAVDGIDITVNKGEVLAIVGESGSGKSVGMLAVMGLLPKTA CEEEEEEEEEEEECCCCCEEEECCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCH TVTADVMMFDGMDLRTLSDSQRRKIIGRDISMIFQEPVASLNPCFTVGYQLEEVLKQHMG HEEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCC MGASASRARAIELLKLVGIRDAVERLKSFPHQMSGGQCQRVMIAIAIACNPKLLIADEPT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCCEEEEECCCC TALDVTIQKQILDLLMRLQVEHGMGLIIITHDMGVVAETADRVIVQYKGHKMEDADVLSL CEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCEEEEEECCCCCCCHHHHHH FSAPKHPYTRALLSALPENATGNRLPTVSDFVFENISAGEAR HCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]