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The map label for this gene is pdxJ [H]

Identifier: 23502256

GI number: 23502256

Start: 1339687

End: 1340427

Strand: Reverse

Name: pdxJ [H]

Synonym: BR1385

Alternate gene names: 23502256

Gene position: 1340427-1339687 (Counterclockwise)

Preceding gene: 23502258

Following gene: 23502255

Centisome position: 63.59

GC content: 59.51

Gene sequence:

>741_bases
ATGCCTGCAAAATTATCGGTCAATCTCAATGCCATCGCCATGCTGCGCAATCGCCGCGACCTGCCGTGGCCAAGCGTTAC
CGGGCTTGGGCGGGCGGCACTTGCAGCAGGCGCTGCCGGGCTGACGGTTCATCCGCGGCCCGACCAGCGGCATATCCGCT
TTTCCGACCTCGGTGATATTCGCGCGCTGATCGACGATGAATATCCGCAGGCTGAATTCAATATAGAGGGTTTTCCCAGT
GAGGCCTTTCTCGATCTTGTGGAAAAGCATGAGCCGGAACAGGTGACGCTGGTGCCGGACGATCCGATGCAGGCGACATC
CGATCATGGCTGGGATTTCATGTCGAAGGCGGATTTTCTGGCGCCCATCGTTGCCCGGCTGAAAGGGCGCGGAATGCGGG
TTTCACTCTTCGCCGATCCCGATTCGCTCGGCTATGAACGCGCCAAGGCTATCGGTGCCGACCATGTGGAGCTTTATACC
GGGCCTTACGGCGCGACCCATGACGACCCTGCCGCAGCCGCGCGCGAGCTGGACCGGCTGGAAAAGGCGGCAAGGGCGGC
CACTGCGCTCGGCCTTGCTGTCAATGCCGGGCACGATCTCACAGTGGACAATCTTCCCGCGCTCGTAAAACGTATCCCGC
AGCTTGCCGAAGTTTCTATCGGTCATGGATTGACAGCCGATGCATTGATGTATGGGATACCGGTAACGGTAAGCCGCTAC
ATCACAGCTTTGGCTGGATAA

Upstream 100 bases:

>100_bases
TAACGCTTTGTTTTGTCGCATTTTCTGATGCAAAACCGTTTCACACTTTTGCTGGAAATGCTCTATAAAGCGGAATAATC
ATTCGGGGAGCCATGCTTCG

Downstream 100 bases:

>100_bases
AACATCAACTGGATGCGCTATGTGCATAGCTCGCGATCAAGCCTTGCAAAAAGCGCATTTGCATTCAGGTGGGACAAGCT
CTAGGGCAGTCTGCCACTGT

Product: pyridoxine 5'-phosphate synthase

Products: NA

Alternate protein names: PNP synthase [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPAKLSVNLNAIAMLRNRRDLPWPSVTGLGRAALAAGAAGLTVHPRPDQRHIRFSDLGDIRALIDDEYPQAEFNIEGFPS
EAFLDLVEKHEPEQVTLVPDDPMQATSDHGWDFMSKADFLAPIVARLKGRGMRVSLFADPDSLGYERAKAIGADHVELYT
GPYGATHDDPAAAARELDRLEKAARAATALGLAVNAGHDLTVDNLPALVKRIPQLAEVSIGHGLTADALMYGIPVTVSRY
ITALAG

Sequences:

>Translated_246_residues
MPAKLSVNLNAIAMLRNRRDLPWPSVTGLGRAALAAGAAGLTVHPRPDQRHIRFSDLGDIRALIDDEYPQAEFNIEGFPS
EAFLDLVEKHEPEQVTLVPDDPMQATSDHGWDFMSKADFLAPIVARLKGRGMRVSLFADPDSLGYERAKAIGADHVELYT
GPYGATHDDPAAAARELDRLEKAARAATALGLAVNAGHDLTVDNLPALVKRIPQLAEVSIGHGLTADALMYGIPVTVSRY
ITALAG
>Mature_245_residues
PAKLSVNLNAIAMLRNRRDLPWPSVTGLGRAALAAGAAGLTVHPRPDQRHIRFSDLGDIRALIDDEYPQAEFNIEGFPSE
AFLDLVEKHEPEQVTLVPDDPMQATSDHGWDFMSKADFLAPIVARLKGRGMRVSLFADPDSLGYERAKAIGADHVELYTG
PYGATHDDPAAAARELDRLEKAARAATALGLAVNAGHDLTVDNLPALVKRIPQLAEVSIGHGLTADALMYGIPVTVSRYI
TALAG

Specific function: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate [H]

COG id: COG0854

COG function: function code H; Pyridoxal phosphate biosynthesis protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788917, Length=234, Percent_Identity=36.7521367521368, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR004569 [H]

Pfam domain/function: PF03740 PdxJ [H]

EC number: =2.6.99.2 [H]

Molecular weight: Translated: 26447; Mature: 26316

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKLSVNLNAIAMLRNRRDLPWPSVTGLGRAALAAGAAGLTVHPRPDQRHIRFSDLGDI
CCCEEECCHHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCEECCCCHHH
RALIDDEYPQAEFNIEGFPSEAFLDLVEKHEPEQVTLVPDDPMQATSDHGWDFMSKADFL
HHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
APIVARLKGRGMRVSLFADPDSLGYERAKAIGADHVELYTGPYGATHDDPAAAARELDRL
HHHHHHHCCCCEEEEEEECCCHHCHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
EKAARAATALGLAVNAGHDLTVDNLPALVKRIPQLAEVSIGHGLTADALMYGIPVTVSRY
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHCCCHHHHHH
ITALAG
HHHHCC
>Mature Secondary Structure 
PAKLSVNLNAIAMLRNRRDLPWPSVTGLGRAALAAGAAGLTVHPRPDQRHIRFSDLGDI
CCEEECCHHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCEECCCCHHH
RALIDDEYPQAEFNIEGFPSEAFLDLVEKHEPEQVTLVPDDPMQATSDHGWDFMSKADFL
HHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
APIVARLKGRGMRVSLFADPDSLGYERAKAIGADHVELYTGPYGATHDDPAAAARELDRL
HHHHHHHCCCCEEEEEEECCCHHCHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
EKAARAATALGLAVNAGHDLTVDNLPALVKRIPQLAEVSIGHGLTADALMYGIPVTVSRY
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHCCCHHHHHH
ITALAG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA