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The map label for this gene is recJ [H]

Identifier: 23502146

GI number: 23502146

Start: 1231357

End: 1233141

Strand: Reverse

Name: recJ [H]

Synonym: BR1270

Alternate gene names: 23502146

Gene position: 1233141-1231357 (Counterclockwise)

Preceding gene: 23502147

Following gene: 23502145

Centisome position: 58.5

GC content: 61.62

Gene sequence:

>1785_bases
ATGACAACAGAGCGTTTTTTCCTCGGAGTGAAACAATCCGCAACCGGCCAGAAATGGGTGGATCGGCTGGGTCCGCGTGA
AGCCAATACGGCACTTGCCATTGCACAGCATCATGGCATTTCCGATCTGGTTGCGCGTGTGCTTGCGGGGCGGGGGGTGT
CCGTGGAAGGGGCGCCGGAATTTGTCGATCCGACGTTGCGCAATCTCATGCCCGACCCGGCGACGCTCAACGACATGGAC
AATGCGGCGGGGCGCATTGCCGATGCGATCCAGCGCCGCGAGACGGTCGCGATCTTTGGCGATTATGATGTGGACGGCGC
GTGTTCTTCCGCGCTGATGGCGCGGTTTCTCAAACATTACGGTGTCCAGCATTCCATCTATATCCCCGACCGGATTTTCG
AGGGCTATGGCCCCAATCCCGATGCGATGCGGGAACTGGCCGCCAAGGGAGCAAGCCTGATCGTTACGGTCGATTGCGGC
ACCAACAGCGTGCCGTCCATCACCGCCGCCAAACAGGCCGGGGCAGATGTCGTCGTGCTTGACCACCATCAGGTCGGCGG
CGATCTGCCGGAAGATGCGGTGGCGATCGTCAATCCCAACCGTGAAGACGATATTTCGCAGCAAGGCCATCTCTGCGCGG
CAGGCGTGGTTTTCCTGGCATTGGTGCAGGTGGCCAAAATCCTGCGCGCGCGCGGCAAGGGGCCGGGGCCTGACCTTCTT
TCCATGCTTGATCTCGTTGCACTGGCGACGGTTTGCGATGTGGTGCCGCTCAAGGGCGTCAACCGCGCCTTTGTGGTGAA
GGGCCTGCTCGTTGCCCGCGGGCAAAGCAATGTCGGCCTGGCGGCGCTGGCGCGCGTTGCGCGCATCGGGGAGCCGCTCA
ATGCCTTTCATCTGGGGTATCTGATCGGTCCGCGCATCAATGCGGGTGGGCGCATTGGCGATGCGGGCTTGGGCGCGCGC
CTTCTCACGCTGGATGACCCGGCAATGGCGGATCGCATTGCAATGGAACTCGACAGGCTCAATCAGGAACGGCAGGCCAT
GGAGGCCGAAATGCTCATGGAGGCGGAAGCGGAAGCTTCGCTGGAGATTTCGGGCGGGGCGGGCGCATCCGTGATCGTAA
CGGCCAGTGACCGCTGGCATCCGGGCATTGTCGGCCTGCTAGCCTCCCGGCTGAAGGAAAAGGCGCGGCGTCCGGCCTTT
GCTATTGCATTCAACGCCAATGGTGTCGGCTCCGGCTCGGGGCGTTCGATTTCAGGTCTTGATCTGGGCAAGCTGGTGCG
CGGTGCGGTGGAAAAGGGCCTGCTGGTGAAGGGCGGTGGCCATGCCATGGCGGCGGGCATTACCATTGAGCGCGGCAATC
TTGGCGCGCTGCGCGCCTATCTGGAAGAAGAAGCCGCGGATATCGTGTCGCGCTTGCGTGAAAACCAGAGCCTTTCCATC
GATGGGGCGCTGGCTGCATCCGGTGCGACCGTGGCGCTTTATGAAGCTTTGCAGAAAGCCGGTCCTTATGGTTCTGCGCA
TCCGCAGCCCCTGTTGGCGCTGCCGCATCATGTGCTGGCCGATGTGCGGGGCGTCGGGCGGGATCATGTGCGGGTGACAT
TGCGCGGGGCAGACGGCAAGCGGGTCAATGCGATCGCATTTCGAGCGGCAGAAGGCGATCTTGGACGCTTCCTGTTCAAC
AATATCGGCTGCAGTGTGCATGTGGCCGGAAATCTTTCTCTCAACCATTGGAATGGTTCTGTTTCTCCCCAAATCCAGAT
TCTGGATGCGGCTTTGCCTGTTTAA

Upstream 100 bases:

>100_bases
CCTGAAATTATCAATCGATTGGTTGCGCATGGCTTGGCGCGGGGAAGCTGACTTTAATCTCATCATTGAAGAACGCTGGC
TTTTGTGTCTTTAAGGACCA

Downstream 100 bases:

>100_bases
AGCTCTGGTTCATTTGAAATTTCTGGATTTTTTGGCTTCCCACCCTTGTGAAGGATGGGGCCGAATTCCCATATGAGCCC
TGATTTAAACATTGAGACAG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MTTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPEFVDPTLRNLMPDPATLNDMD
NAAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHYGVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCG
TNSVPSITAAKQAGADVVVLDHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLL
SMLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGYLIGPRINAGGRIGDAGLGAR
LLTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEASLEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAF
AIAFNANGVGSGSGRSISGLDLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSI
DGALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGKRVNAIAFRAAEGDLGRFLFN
NIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV

Sequences:

>Translated_594_residues
MTTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPEFVDPTLRNLMPDPATLNDMD
NAAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHYGVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCG
TNSVPSITAAKQAGADVVVLDHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLL
SMLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGYLIGPRINAGGRIGDAGLGAR
LLTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEASLEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAF
AIAFNANGVGSGSGRSISGLDLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSI
DGALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGKRVNAIAFRAAEGDLGRFLFN
NIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV
>Mature_593_residues
TTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPEFVDPTLRNLMPDPATLNDMDN
AAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHYGVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCGT
NSVPSITAAKQAGADVVVLDHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLLS
MLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGYLIGPRINAGGRIGDAGLGARL
LTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEASLEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAFA
IAFNANGVGSGSGRSISGLDLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSID
GALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGKRVNAIAFRAAEGDLGRFLFNN
IGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=569, Percent_Identity=34.2706502636204, Blast_Score=258, Evalue=6e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62194; Mature: 62063

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPE
CCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCCCCCH
FVDPTLRNLMPDPATLNDMDNAAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHY
HCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCGTNSVPSITAAKQAGADVVVL
CCCEEEECCHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEE
DHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLL
ECHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SMLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHE
LIGPRINAGGRIGDAGLGARLLTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEAS
EECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCE
LEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAFAIAFNANGVGSGSGRSISGL
EEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCC
DLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSI
CHHHHHHHHHHCCEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
DGALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGK
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEECCCCC
RVNAIAFRAAEGDLGRFLFNNIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV
EEEEEEEEECCCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
TTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPE
CCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCCCCCH
FVDPTLRNLMPDPATLNDMDNAAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHY
HCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCGTNSVPSITAAKQAGADVVVL
CCCEEEECCHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEE
DHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLL
ECHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SMLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHE
LIGPRINAGGRIGDAGLGARLLTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEAS
EECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCE
LEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAFAIAFNANGVGSGSGRSISGL
EEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCC
DLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSI
CHHHHHHHHHHCCEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
DGALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGK
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCCCEEEEEEECCCCC
RVNAIAFRAAEGDLGRFLFNNIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV
EEEEEEEEECCCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]