| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
Click here to switch to the map view.
The map label for this gene is 23502145
Identifier: 23502145
GI number: 23502145
Start: 1230167
End: 1231195
Strand: Reverse
Name: 23502145
Synonym: BR1269
Alternate gene names: NA
Gene position: 1231195-1230167 (Counterclockwise)
Preceding gene: 23502146
Following gene: 23502143
Centisome position: 58.41
GC content: 61.9
Gene sequence:
>1029_bases ATGACGGGTTCCGGAAACCGCCTAACCAAACTGACGCTTGCACTTGTCCTCGGCCTTGTTGCCGTATTCACGGCTGTCGA TTTCGCTGAGGCTCGCCGCGCGGGCGGTGGCGGTTTTGGTAGCCGTGGCATGCGCACCTATTCTACGCCTGCGCCGACCC GTACCGCGCCCAACAATGCGGCTCCCATCGAACGCTCGATGACACCGAACACAGGCGCGACGCAAACGACCCGTCCCGCT GCGGCTGGCGCACAGAATGCGGCACAGCGTTCCGGTGGCCTGTTCGGCAATTTTGGCCGTTCCATGCTTGGCGGCCTGCT GGTCGGCGGCCTGATCGGCATGTTGCTTGGCAATGGTCTCGGCGGTCTTGCCGGCATGTTCGGCCTGATCCTGCAAGTGG CCGTCATTGCCCTGATCGCCATGTTCGTGATGCGCATGTTTGCCAATCGCCGCCAGACGGCAGCGGCTGGCGCGGGCCAT GCCGGGGCGCAGCCTTTCGGCGCGAGCCAGCCTTTCGGTTCGGCGAAAAGCGCATCCGGTCAGGGCAGCTTTAGCGGCCG CACACCATCCGTCAATCCGTTTGAGACCAAACAGGCTGCGGCTCCCGTCGTGGAGGATGAGCCGATGGATGTCGGACAGG AAGATCTGGATCGTTTTGAGCAGATGCTTGTGGATATCCAGGGGGGCTATGGCCGTGAGGATTATGCGGCGCTGCGCAAG CTCACCACGCCGGAAGCCATGTCTTATCTGGCGGAAGAACTTGGCGAAATCGCATCCGGCGGCAAGCGCAATGAAGTGAA GGATGTGAAGCTTCTTCAGGGCGATGTGTCCGAAGCCTGGCGCGAAGGCAATGTGGAATATGCAACGGTGGCGATGCGCT ATTCGGCCATCGACGTGATGGTGGATCGCACCAGCGGCGCGGTTGTCGAAGGCAACCCGAATGAGCCGGTGGAAAGCGTC GAGCTATGGACCTTCACCCGCACAGATGGCGGCGCGTGGCAACTCGCCGCTATTCAAGGCACGGAATAA
Upstream 100 bases:
>100_bases CGAATTCCCATATGAGCCCTGATTTAAACATTGAGACAGGGCCCTGAAGGGGGCCCTGCTTTTACAGAATCGTCGAAACT GCTCTAACCGGGAGAAACGA
Downstream 100 bases:
>100_bases GTCTTTTCTTTCAACAAGAAGCCCGGTCGCGAGACCGGGCTTTTTCTTTTATCACCAGGTGCCGATGTTTTCGGCAGATG CCCAAGGCTCCTGCGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTGSGNRLTKLTLALVLGLVAVFTAVDFAEARRAGGGGFGSRGMRTYSTPAPTRTAPNNAAPIERSMTPNTGATQTTRPA AAGAQNAAQRSGGLFGNFGRSMLGGLLVGGLIGMLLGNGLGGLAGMFGLILQVAVIALIAMFVMRMFANRRQTAAAGAGH AGAQPFGASQPFGSAKSASGQGSFSGRTPSVNPFETKQAAAPVVEDEPMDVGQEDLDRFEQMLVDIQGGYGREDYAALRK LTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESV ELWTFTRTDGGAWQLAAIQGTE
Sequences:
>Translated_342_residues MTGSGNRLTKLTLALVLGLVAVFTAVDFAEARRAGGGGFGSRGMRTYSTPAPTRTAPNNAAPIERSMTPNTGATQTTRPA AAGAQNAAQRSGGLFGNFGRSMLGGLLVGGLIGMLLGNGLGGLAGMFGLILQVAVIALIAMFVMRMFANRRQTAAAGAGH AGAQPFGASQPFGSAKSASGQGSFSGRTPSVNPFETKQAAAPVVEDEPMDVGQEDLDRFEQMLVDIQGGYGREDYAALRK LTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESV ELWTFTRTDGGAWQLAAIQGTE >Mature_341_residues TGSGNRLTKLTLALVLGLVAVFTAVDFAEARRAGGGGFGSRGMRTYSTPAPTRTAPNNAAPIERSMTPNTGATQTTRPAA AGAQNAAQRSGGLFGNFGRSMLGGLLVGGLIGMLLGNGLGGLAGMFGLILQVAVIALIAMFVMRMFANRRQTAAAGAGHA GAQPFGASQPFGSAKSASGQGSFSGRTPSVNPFETKQAAAPVVEDEPMDVGQEDLDRFEQMLVDIQGGYGREDYAALRKL TTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVMVDRTSGAVVEGNPNEPVESVE LWTFTRTDGGAWQLAAIQGTE
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35605; Mature: 35473
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSGNRLTKLTLALVLGLVAVFTAVDFAEARRAGGGGFGSRGMRTYSTPAPTRTAPNNA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCC APIERSMTPNTGATQTTRPAAAGAQNAAQRSGGLFGNFGRSMLGGLLVGGLIGMLLGNGL CCCCCCCCCCCCCCCCCCCHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GGLAGMFGLILQVAVIALIAMFVMRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QGSFSGRTPSVNPFETKQAAAPVVEDEPMDVGQEDLDRFEQMLVDIQGGYGREDYAALRK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH LTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVM CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHEEE VDRTSGAVVEGNPNEPVESVELWTFTRTDGGAWQLAAIQGTE EECCCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure TGSGNRLTKLTLALVLGLVAVFTAVDFAEARRAGGGGFGSRGMRTYSTPAPTRTAPNNA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCC APIERSMTPNTGATQTTRPAAAGAQNAAQRSGGLFGNFGRSMLGGLLVGGLIGMLLGNGL CCCCCCCCCCCCCCCCCCCHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GGLAGMFGLILQVAVIALIAMFVMRMFANRRQTAAAGAGHAGAQPFGASQPFGSAKSASG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QGSFSGRTPSVNPFETKQAAAPVVEDEPMDVGQEDLDRFEQMLVDIQGGYGREDYAALRK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH LTTPEAMSYLAEELGEIASGGKRNEVKDVKLLQGDVSEAWREGNVEYATVAMRYSAIDVM CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHEEE VDRTSGAVVEGNPNEPVESVELWTFTRTDGGAWQLAAIQGTE EECCCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA