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The map label for this gene is ybbI [C]

Identifier: 23502057

GI number: 23502057

Start: 1156802

End: 1157188

Strand: Reverse

Name: ybbI [C]

Synonym: BR1179

Alternate gene names: 23502057

Gene position: 1157188-1156802 (Counterclockwise)

Preceding gene: 23502062

Following gene: 23502055

Centisome position: 54.9

GC content: 55.81

Gene sequence:

>387_bases
GTGCGCGAATATTATACGATAACGGAATTGACGAGGGAGTTCGGAATTTCCACCCGGACGCTTCGTTTCTATGAGGATGA
AGGGTTGATCGCTCCGGTGCGGCGCGGTCGTACACGTCTATTCCGACCGTCCGACCGACATCTTCTCAAGCAGATCATGC
GTGGCAAGCGATTGGGCTTTTCTATCGCGGAAATCCACGAAATCATCCAGATGTATCGTGAGCCACCGGGGGAGACCGGG
CAGCTCAAGCTGCTGATGAAGCGCGTGGAAGAAAAGCGCGCCGATTTGCGCCAGAAGCGCCGGGATATCGATGAAACGCT
TGGGGAACTCGATCAAGTCGAGGAAGCCTGCATAGAGCGTCTGGCGGAGCTTGGCGTATCGACCTGA

Upstream 100 bases:

>100_bases
ATTGCCAGTGATAATTTAGTTTGAAGCGGTTTAATATTGACTTTTACGTAAATGAAGTAGCACAACAGTTACTCGCATGT
TGTGAAACAGGGATGTCCTA

Downstream 100 bases:

>100_bases
TATGCCGGCTTCATTGCGCCCCGGCACCAGGCACGGGCGAGCACATGGCGGCTATTTCGCGCACGGTGCTGTTGTTCTCC
TGATTGGCTTTGCCGGAAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRTRLFRPSDRHLLKQIMRGKRLGFSIAEIHEIIQMYREPPGETG
QLKLLMKRVEEKRADLRQKRRDIDETLGELDQVEEACIERLAELGVST

Sequences:

>Translated_128_residues
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRTRLFRPSDRHLLKQIMRGKRLGFSIAEIHEIIQMYREPPGETG
QLKLLMKRVEEKRADLRQKRRDIDETLGELDQVEEACIERLAELGVST
>Mature_128_residues
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRTRLFRPSDRHLLKQIMRGKRLGFSIAEIHEIIQMYREPPGETG
QLKLLMKRVEEKRADLRQKRRDIDETLGELDQVEEACIERLAELGVST

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15166; Mature: 15166

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRTRLFRPSDRHLLKQIMRGKRLGF
CCCHHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHCCHHCCCCCHHHHHHHHHCCCCCCC
SIAEIHEIIQMYREPPGETGQLKLLMKRVEEKRADLRQKRRDIDETLGELDQVEEACIER
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELGVST
HHHCCCCC
>Mature Secondary Structure
MREYYTITELTREFGISTRTLRFYEDEGLIAPVRRGRTRLFRPSDRHLLKQIMRGKRLGF
CCCHHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHCCHHCCCCCHHHHHHHHHCCCCCCC
SIAEIHEIIQMYREPPGETGQLKLLMKRVEEKRADLRQKRRDIDETLGELDQVEEACIER
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELGVST
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA