Click here to switch to the map view.

The map label for this gene is ycbC [C]

Identifier: 23502055

GI number: 23502055

Start: 1154836

End: 1155642

Strand: Reverse

Name: ycbC [C]

Synonym: BR1177

Alternate gene names: 23502055

Gene position: 1155642-1154836 (Counterclockwise)

Preceding gene: 23502057

Following gene: 23502054

Centisome position: 54.83

GC content: 56.13

Gene sequence:

>807_bases
TTGGAGCACAGGTTGTTTTACGGATTTTCCAAGATTTTCTGGCTGTTTTTCCAGCCCCTTACGATTATTTTTCTTCTGGT
GGCAATTGGTCTTCTTGCCGCCTGGCGTGGTTTTCGGCGGCTAGGTATCGCGGTGCTCATACCCGCGACGGCGCTCCTCT
TTTTCGGCGCCTTCACCACCGGTGGCGCAATGCTGCTGTCGCCTCTGGAGAACCGTTTTCCCAAATCCGAAAGCCTGCCA
CAACATGTGGATGGCATTATCGTGCTGGGCGGCTACATGAACGGGGAAATTGTTGCCGGGCGGCAGAATTTCGAGCTTAA
CAGTGCTGCTGACCGCATCGTCGAGACCATGCGGCTTGCCCGGCTTTATCCCGATGCGAAGATCCTCGTTTCCGGCGGTG
AAGGGACTTTTTTTGAAAAATCGGCGCGGGAGGCGGAGACGACCCGCGCGCTTCTGTTGGATCTTGGTTTTTCCGGCAAT
CGCTACATTTTTGAAGGCAAATCACGCAATACGGTGGAAAATGCGATTTTCTCGCAGGCTCTGGCGCAGCCCAAGCCGGG
CGAAACATGGCTTCTGGTGACCTCGGCCTATCATATGCCGCGTGCGGTTGGCTGTTTCCGCAAGGCGGGGTTCGACGTGA
CGGCCTGGCCGGTCGATTACAAAACCCGCACGCGGGAGACGTTTGGCCTTTATCTCGAATCTCCCAATGACGCGCTTTCG
CGGTTCAGCATGGCTTTGCGGGAATGGACGGGGCTTGCCGCATATTGGTGGACAGGCCGCACAGATATGCTTCTGCCTCA
TTCCTGA

Upstream 100 bases:

>100_bases
CGATTCACGACAAATCTCTAACACAGCCTGACGCCCCGCTATAGTGTATCGATGAGAGGAGATTCGTTTCAGATCGCCGG
ATCAGGATAAGCTCAAAGGC

Downstream 100 bases:

>100_bases
TGCCGCATTTTCGCCGTGTCTGTAAAGCTTCCATTAAGTATGATATTTCTCAAGCGATTGATAAATAAATATATTTTATA
ATGCGTAAAAGCCTTGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEHRLFYGFSKIFWLFFQPLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSESLP
QHVDGIIVLGGYMNGEIVAGRQNFELNSAADRIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGN
RYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALS
RFSMALREWTGLAAYWWTGRTDMLLPHS

Sequences:

>Translated_268_residues
MEHRLFYGFSKIFWLFFQPLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSESLP
QHVDGIIVLGGYMNGEIVAGRQNFELNSAADRIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGN
RYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALS
RFSMALREWTGLAAYWWTGRTDMLLPHS
>Mature_268_residues
MEHRLFYGFSKIFWLFFQPLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSESLP
QHVDGIIVLGGYMNGEIVAGRQNFELNSAADRIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGN
RYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALS
RFSMALREWTGLAAYWWTGRTDMLLPHS

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30065; Mature: 30065

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHRLFYGFSKIFWLFFQPLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
GGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAADRIVETMRLA
CCHHEECHHHHCCCCCCCCHHHCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHH
RLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQA
HHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHH
LAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALS
HCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCHHHHH
RFSMALREWTGLAAYWWTGRTDMLLPHS
HHHHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MEHRLFYGFSKIFWLFFQPLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
GGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAADRIVETMRLA
CCHHEECHHHHCCCCCCCCHHHCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHH
RLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQA
HHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHH
LAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALS
HCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCHHHHH
RFSMALREWTGLAAYWWTGRTDMLLPHS
HHHHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA